Gene Psyr_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0453 
Symbol 
ID3365929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp488697 
End bp489416 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID637650793 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_233561 
Protein GI66043720 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGT CGCGCTTTTT TACTGAAACG CCGCTGAGTC TGGGCGAGCA TGAACTGCCT 
GAGGCCCAGG CGCATTACAT CAGCCGCGTG CTGCGCATGA CCGAAGGTGA CGCGCTGCAA
CTGTTCGACG GGTCGGGCCA GGAGTTTCGC GGCACGTTGC TGGAAGTCGG CAAGAAGCGC
GTGCATGTGC AGCTCACCGA AAGCTTCGCG GGGCAGGTGG AGTCAGGCCT GCGCATTCAT
CTCGGTCAAG GCCTGTCGCG CGGCGAGCGG ATGGACTGGG CCATTCAAAA AGCCACCGAG
CTGGGCGTCA GCGAAATTAC GCCGATTGTC AGCGAACGCT GCGAGGTGCG CCTCAAGGAC
GAACGTGCCG AGAAGCGCCA GGCACACTGG CAGCAGATCG CGATCAGCGC CTGTGAGCAA
TGTGGTCGCT CCGTGGTGCC GGTGATTCAT GCACCGATGC CGCTGGCCGA GTGGATCAAG
CACACCGAAG CCGACCTGAA ACTGGTCCTG CACCCGGTGG CCGAACCCCT GACCAGCCAT
GACAAGCCCG CCAGTCTGGC CTTTCTGATT GGTCCGGAAG GCGGTCTGAA CGATGCGGAA
GTCACTCAGG CGCAAGACGC AGGCTTCCAC GCCGCGCGCC TCGGCCCACG CGTGCTGCGC
ACTGAAACCG CTCCCGTGGT CGCGCTCAGC GTGGCACAAC AGCTGTGGGG CGATTTTTGA
 
Protein sequence
MRLSRFFTET PLSLGEHELP EAQAHYISRV LRMTEGDALQ LFDGSGQEFR GTLLEVGKKR 
VHVQLTESFA GQVESGLRIH LGQGLSRGER MDWAIQKATE LGVSEITPIV SERCEVRLKD
ERAEKRQAHW QQIAISACEQ CGRSVVPVIH APMPLAEWIK HTEADLKLVL HPVAEPLTSH
DKPASLAFLI GPEGGLNDAE VTQAQDAGFH AARLGPRVLR TETAPVVALS VAQQLWGDF