Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0452 |
Symbol | |
ID | 3365928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 487976 |
End bp | 488590 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637650792 |
Product | HylII |
Protein accession | YP_233560 |
Protein GI | 66043719 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTACG GAGAAAAATT CAACGCCTGG TCGCATCTGG TTGGCGCCGT ACTGGCGGCC GTCGGTGCGA TCTGGCTATT GGTCATGGCC AGCCTGCATG GCGATGTCTG GAAAGTGGTC AGCATGGCCA TCTATGGTGT GTGTCTGGTG ACGCTGTACA GCGTCTCGAC GGTCTACCAC AGCGTCAAGG GACGCTCGAA ATCGATCATG CAGAAGGTCG ACCACTTTTC GATCTACCTG ATGATTGCCG GCAGCTACAC CCCGTTCTGT CTCGTGACAT TGCGCGGCGC GTGGGGCTGG ACCCTGTTCG GCATTGTCTG GGGGCTGGCG CTGATCGGCA TCCTGCAAGA GATAAAACCG CGCTCCGAAG CGCGAATCAT GTCCATCGTG ATTTACGCGG TGATGGGCTG GATCGTGCTG GTGGCCGTCA AGCCACTGCT GGCTGCGCTC GGTGTATCGG GTTTCATCTG GCTGGCCGGA GGCGGCGTGC TGTACACCGT CGGCATCCTG TTCTTCGCCT ACGACCAGAT CCGCCACTTT CACGGCATCT GGCACCTGTT CGTCATTGCC GGCAGTTTGA TGCACTTTGT GGCGATCTGT TTTTATGTGC TGTGA
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Protein sequence | MYYGEKFNAW SHLVGAVLAA VGAIWLLVMA SLHGDVWKVV SMAIYGVCLV TLYSVSTVYH SVKGRSKSIM QKVDHFSIYL MIAGSYTPFC LVTLRGAWGW TLFGIVWGLA LIGILQEIKP RSEARIMSIV IYAVMGWIVL VAVKPLLAAL GVSGFIWLAG GGVLYTVGIL FFAYDQIRHF HGIWHLFVIA GSLMHFVAIC FYVL
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