Gene Psyr_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0448 
Symbol 
ID3365924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp484738 
End bp485673 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content67% 
IMG OID637650788 
Productacyl-carrier-protein S-malonyltransferase 
Protein accessionYP_233556 
Protein GI66043715 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase
[TIGR03131] malonate decarboxylase, epsilon subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC TGTGGGTGTT TCCCGGCCAG GGTTCGCAGC AAACCGGCAT GCTGCATCAG 
TTGCCGGACG AGGCCGTGGT GCGCGACTGC CTGCAGGAAG CCGCCGATGC GCTGGGCGAA
GACGTGCTGG CGCTGGACAC CGCCGGGGCG CTGCAAGCCA CGCGTGCCGT TCAGCTTTGC
CTGTTGATCG CGGGCGTCGC ATGCGCACGC GTGCTGCAGG CGCGTGATTG TGTGCCGGAC
TACCTGGCCG GGCTGTCCAT CGGTGCTTAT CCGGCAGCGG TGGTTTCGGG GGCGCTGGCC
TTTGACGACG CCGTGCGCCT GGTCGCGTTG CGTGGCGAGC TGATGCAAAG CGCCTGGCCG
CAGGGTTACG GCATGACCGC GCTCATCGGC CTGGACCAGA CACAGGTAGA AGCGCTGATC
GGGCAGGTAC ACAGCGCGAA GACACCGGTA TTTCTCGCCA ATATCAACGC CGACAACCAG
ATGGTGATCT CCGGCAGTGC CGAGGCGATG CATCAGGTCG GTCAGTTGGC CAAGGCTGCC
GGAGCGGCAG CGGTCAAGCG TCTTGCGGTC AGCGTACCGT CACATTGCGC CTTGCTGGAC
GCTCCCGCGC AACAACTGGC CGAGGCCTTT TCAAGGGTCG CGCTGCAGGC ACCCACGCTA
CGTTACCTCA GCGGCAGCAC GGCGCGGCCG GTGCTGAGTG CCGAGAAGCT GCGTGACGAC
CTGGCCTTCA ACATGTGCCG GGTCATCGAC TGGCGCAGCA CCGTGGAAAC CGCCTGGGAG
CGGGGCGTGC GCCTGCACAT CGAATTGCCG CCCGGCAGTG TGCTGACCGG GCTGGCACGC
AAAGTATTCC AGCAGGGCAG CGCGCTGGCT TTTCAGGCTG CGCGCCTGGA CAGCCTGGTC
GCGCTGTCGC GCGAGGAGGG TCGCCGCACC CCATAG
 
Protein sequence
MSSLWVFPGQ GSQQTGMLHQ LPDEAVVRDC LQEAADALGE DVLALDTAGA LQATRAVQLC 
LLIAGVACAR VLQARDCVPD YLAGLSIGAY PAAVVSGALA FDDAVRLVAL RGELMQSAWP
QGYGMTALIG LDQTQVEALI GQVHSAKTPV FLANINADNQ MVISGSAEAM HQVGQLAKAA
GAAAVKRLAV SVPSHCALLD APAQQLAEAF SRVALQAPTL RYLSGSTARP VLSAEKLRDD
LAFNMCRVID WRSTVETAWE RGVRLHIELP PGSVLTGLAR KVFQQGSALA FQAARLDSLV
ALSREEGRRT P