Gene Psyr_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0446 
Symbol 
ID3365922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp483306 
End bp484106 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID637650786 
Productmalonate decarboxylase gamma subunit 
Protein accessionYP_233554 
Protein GI66043713 
COG category 
COG ID 
TIGRFAM ID[TIGR03134] malonate decarboxylase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATT CACAACGGGG TTTGAACTGG TTCAACGCCT TGAGCGCAGG TGCCCGTGAA 
GTCACTGGCC TGCCTGCCTC ACTCAAGGTG GCGGATGGCG TGCTGGGCGA GCAGCCGGTG
CGTTTTCTGG CCGTGATTGC CGATACCGAC AACTGCTTTC CCCGGGCACG TCAGGGCGAA
GTCGGCCTGC TGGAAGGCTG GGGCCTGGCC AAAGCGGTGG ACGAGGCTAT CGAGCAGGAT
CGCGACCGCG CCGAAAAGCG CGCACTGATT GCCATCGTCG ACGTCCCGAG CCAGGCCTAC
GGGCGTCGCG AGGAAGCGCT CGGTATCCAT CAGGCACTGG CCGGGGCTGT GGACAGTTAT
GCGCGAGCAC GTCTGGCCGG GCATCCGGTG ATCGGCCTGT TGGTCGGCAA AGCGATGTCC
GGCGCATTTC TGGCCCACGG CTATCAGGCC AATCGATTGA TCGCGCTGCG TGATCCCGGC
GTGATGGTGC ATGCGATGGG CAAGGCTTCG GCAGCCCGCG TAACCCTGCG CAGCGTCGAG
GATCTGGAAA AGCTCGCCGC CAGCATTCCG CCGATGGCTT ACGACATTGA CAGCTACGCC
AGCCTCGGTC TGTTGTGGGA AACCCTGACG GTCAAGCAGA TCGAACAGCC CGCTGCGGAT
GACCTGGTTC AGGTGCGCAA CGTGCTGAGC AGTGCGATCA AGGACGTACA GGCCCGCGGC
GTCGATCTGA GCAGCCGCCT GGGCGCGAGC AACCGTGCGG CGTCGGTCAA TGTGCGCCAG
TTGCTGCGGG CGCAATGGTG A
 
Protein sequence
MSHSQRGLNW FNALSAGARE VTGLPASLKV ADGVLGEQPV RFLAVIADTD NCFPRARQGE 
VGLLEGWGLA KAVDEAIEQD RDRAEKRALI AIVDVPSQAY GRREEALGIH QALAGAVDSY
ARARLAGHPV IGLLVGKAMS GAFLAHGYQA NRLIALRDPG VMVHAMGKAS AARVTLRSVE
DLEKLAASIP PMAYDIDSYA SLGLLWETLT VKQIEQPAAD DLVQVRNVLS SAIKDVQARG
VDLSSRLGAS NRAASVNVRQ LLRAQW