Gene Psyr_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0439 
Symbol 
ID3365915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp476310 
End bp477029 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content60% 
IMG OID637650779 
Producthypothetical protein 
Protein accessionYP_233547 
Protein GI66043706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.855778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCACCT TCAACATTGC ACGATGGCAA GCCTGGGCGC CGGGCCTGGC GAGCGCGGAA 
GACTGGCAGA GGTGGAGCCT CGATCCGACG TTGCTGGAAA CCAGTGACGC AGCGCCAGAC
GTGTCTTTTC TTCCTGCGAT GCAACGCCGC CGCCTGGGCC GTATGGCAAG AATGGCGTTT
GCTGTCGGCT GGCCGTTGAC TGAAGGGCTG GGGCGCGTCC CGCTGGTGTT TGTCTCGCGC
CACGGAGAAA CCCCGAGGAC CTTTGAAATC CTGCGTGATC TGGCCGCCAA CGAGCCGCTT
TCACCGACCC AGTTCAGCCT TTCAGTGCAT AACGCCGTAA TTGGTCTGTG GTCGATCATG
CGCGGTGAAA CAAGTGAGAT GACAGCCCTG GCCGCCACAG GCGACGGGCT GGAGTATGGA
GCATTCGAGG CCGCAGCGTT GCTGGCCGAG GGAGCAGAAG CAGTATTGCT TGTGGTGACT
GAAGAACAGC CACCGCAAGC CTATGCCCAA TGGATTGATG ACGTGCCCTT TCCCTACGCG
GTCGGCTTGC TGCTGACGCC GGGGAATGAG TGGCAGCTGT CTCTGAACAC CGATACGCAA
GGCACAACGC GCACTCAGTG GCCTCACGCC CTGAACCTGC TGCGGGCCTT GCACACTGAT
CAATCCGTCT GCCTGCACCC TTGGAATAAC CGGTTATGGA ACTGGCAACG CAGTCACTGA
 
Protein sequence
MITFNIARWQ AWAPGLASAE DWQRWSLDPT LLETSDAAPD VSFLPAMQRR RLGRMARMAF 
AVGWPLTEGL GRVPLVFVSR HGETPRTFEI LRDLAANEPL SPTQFSLSVH NAVIGLWSIM
RGETSEMTAL AATGDGLEYG AFEAAALLAE GAEAVLLVVT EEQPPQAYAQ WIDDVPFPYA
VGLLLTPGNE WQLSLNTDTQ GTTRTQWPHA LNLLRALHTD QSVCLHPWNN RLWNWQRSH