Gene Psyr_0433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0433 
Symbol 
ID3365909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp472061 
End bp472795 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content63% 
IMG OID637650773 
Productglycosyl transferase family protein 
Protein accessionYP_233541 
Protein GI66043700 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.310079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAGC CTTGCGTGAT CATTCCGGTG TTTGACCACG AGCTGGCCGT GCCCACCGTG 
GTCAAGGCCG TGCGCAACGC CGGGTTGCCG TGCATCCTGG TCGACGATGC CAGCAGCCCG
GCCTGCGAAG CCGTGTTACA GCAGTTGGCA CAGGGCGAGG CTATCTACCT GCTGCGCCTG
CCGGTCAATC AGGGCAAGGG CGGCGCGGTG ATGGCGGGGT TCCGCGAGGC GCTCCGGCTG
GGTTTCAGCC ATGCGTTGCA GGTCGATGCC GATGGCCAGC ATGATCTGAG TGATATCCCG
CTGTTTCTGG AGCAGTCACG CCAGCACCCG GATGCGCTGA TCTGCGGCTA TCCGCAGTTT
GACGAGAGCG TGCCCAAAGG CCGTCTGTAT GCACGCTACC TGACCCACGT CTGGGTGTGG
ATCAATACCC TGTCGTTGCA CATTCGCGAC TCCATGTGCG GCTTTCGCCT TTATCCGCTG
GCGCCGGTGG TGGCGCTGAT CGACCGCGTG CAGATCGGCA GGCGCATGGA TTTCGACTCG
GAAATTCTCG TGCGCCTGTC CTGGCGCGGC CAGCCGATGC GCTGGCTGCC GACCCGGGTT
CACTACCCGC AGGACGGCCT GTCGCATTTC CGCCTGTTTC ACGACAACGC GCTGATTTCG
AAAATGCACG CCAAGCTGTT CTTCGGCATG CTGGTACGCC TGCCCATGAT CCTGTGGCGA
CGGTGGCGGC CATGA
 
Protein sequence
MHKPCVIIPV FDHELAVPTV VKAVRNAGLP CILVDDASSP ACEAVLQQLA QGEAIYLLRL 
PVNQGKGGAV MAGFREALRL GFSHALQVDA DGQHDLSDIP LFLEQSRQHP DALICGYPQF
DESVPKGRLY ARYLTHVWVW INTLSLHIRD SMCGFRLYPL APVVALIDRV QIGRRMDFDS
EILVRLSWRG QPMRWLPTRV HYPQDGLSHF RLFHDNALIS KMHAKLFFGM LVRLPMILWR
RWRP