Gene Psyr_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0429 
Symbol 
ID3365905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp467655 
End bp470030 
Gene Length2376 bp 
Protein Length791 aa 
Translation table11 
GC content65% 
IMG OID637650769 
Producthypothetical protein 
Protein accessionYP_233537 
Protein GI66043696 
COG category[R] General function prediction only 
COG ID[COG4258] Predicted exporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCG TAATGACTTC AAAGACTGAG CGGCTGTTGC CGCGACTGTT CCTGCTGATT 
CTGGCGGGCG TATTGGCGCT GGCTGGCTGG CAGTGGCACG ACCGCTCGCC GCTGTCGGCC
AACCTGATGG AGCTGGTGCC GGGCACCGAT AACGACGAAC TGGTGGTGAG CGCCGAAAAG
CGCATGCAGG AACCGCTCAA CCGCGAAATG CTGGTGCTGG TGGGCCACAG CGATCGGCAG
AAGGCCGTCG AACTGGCGCG CAACCTGGCT GAACAATGGC AGTCGACCGG CCTGTTCGAG
AAGGTCCAGT GGTCGCTGCA GGCCGACCTG CCCGCGCTGC GCACCCAGTT GCTGCAAGGG
CGCATCGCCA TGTTGCCGAC AGCGGACCGC ACACTGCTGA TCGACGACCC GAAGACCTTC
ATCGAACAGC GCGTACAGAC GCTGTTCGAC CCGTTTGCCG GGTTCAGCCT GGTGCCTGGT
CAGGATGACT GGCTGGGGCT GACCGGACGT ATCCAGAACG GCCTGCCGAA GCAGGGCTCG
GTCGAGGCGG ACCTGGCCAG TGGCGCGCTG GTGGCCAGCA CCGAGGGTAA AAGCTGGGTA
CTGCTGCGTT CACGAACCCG AACCGATGCC TTCGATATGC ACCTGCCCGG CCAGGTTGCC
GACCTGCTGG CGCAAGCGCG GGTGCAGGCC AGTCAGGCGG GGGGGCAATT GCTCGCGGCC
AGCGGGCTGC TTTACGCTGC CGACGGGCAG AAGCAGGCCA GCCGGGAAAT CACCTGGGTC
GGCGGTGGCG CAACGGTCGG TATCCTGTTG TTGCTGTTGC TCGCCTTCCG CCGCTGGAGC
GTGCTGCTGG CATTCGTGCC GGTGGTGGTT GGCATGCTGT TCGGCGCAGT GGCCTGCGTC
GCGATATTCG GCAGCATGCA CGTCATGACG CTGGTGCTGG GCTCGAGCCT GATCGGGGTG
GCGGTGGATT ACCCGCAGCA TTACCTGTCC AAGAGCTGGA GCCTCAAGCC CTGGCGCAGC
TGGCCCGCCT TGCGCCTGAC CCTGCCGGGC CTGAGCCTGA GCCTGATCAC CAGTTGCATC
GGCTACCTGG CGCTGGCCTG GACACCGTTC CCGGCACTCA CGCAAATTGC GGTGTTCTCG
GCGGCCGGCC TGATCGGCGC CTACCTGACG GCGGTGTGCC TGCTGCCCGC GCTGCTCGCC
AACGTCGAGA TCAGCCCTGC CCAGTGGCCG CTGAAACTGG CGCAACTGAT GCTCGATTGC
CGCGCCGCCT TGCTGCTGCG CATCAGCACA CCGATTCTGC TGGTGCTGCT GTTGGCCTTC
TGTGGCGGCG GGCTCTGGCA CCTGACCACC AAGAACGATA TCCGCCAGTG GGTGGCAGCA
CCTCAGGCGT TGACCGATGA AGCCCAGGCC ATCGCACGGA TCACCGGTTA TCAGCCCACC
AGCCAGTTTT TTCTGGTGCG CGGCAAGGAC CAGCAGCAAT TGCTGGATCG GCAGTCCGAA
CTGACCCAAC GGCTCGACCA ACTGGTCAGC ATGGACAAGC TGCAAGGCTA CATGGCGCTC
AACCAGTTGC TCGATTCGCC TGCCGAACAA CAGGCCACCC GCGATGCACT GGGCAAATTG
CCGCAATACT GGGCACCGCT GGTGCAACTT GGCGTTCCGG CCAGCGCCTT GAAGGCTGAA
CTGGCGCAAT TACAGGCACT GCCGACGCAA GACGTCGATC AGGCGCTTCA AGGCCCGCTG
AGCGAGCCGT GGCGCACGCT CTGGCTGGGA CCGACCCGCG ATGACAATGG CGATCAAGGT
GTCGCCAGTA TCGTCAGCCT GCGCGGCATG AACAGCATGG CGTTGCTGCG CGTGCAGGCC
ATCGGGCTGG AGGGCGTGCA ACTGGTCGAC CGCCTGGGTG AGCTCAACGA GGTGTTTGCC
CACACACAGA TCAGTGCAGC GGAATTGAAG CTGGCGTCGT GCGTACTGAT CGTCCTGCTG
CTGATAACTC CGTTTGGCTT CGGTGGTGCG TTGCGCATCG TCGCCCTGCC ACTGCTGGCG
GCCCTGTGCA GCCTCGCAAG CCTGGGCTGG CTCGGTCAGC CGCTGACCCT GTTCAGCCTG
TTCGGCCTGC TGCTGGTCAC GGCGATCAGC GTCGATTACG CCATCCTGAT GCGCGAGCAG
ATAGGCGGCG CGGCGGTCAG CCTGCTGGGC ACGCTGCTGG CGGCGCTCAC CACCTGGCTG
TCGTTCGGGC TGCTGGCCGT TTCCAGCACC CCGGCGATCA GCAACTTCGG CCTGTCGGTC
AGTCTGGGGC TGGCGTTCAG CTTCCTGCTG GCGCCCTGGG CCAGCCCGCG TAAAGCGCTT
CATTCGCCAG CCACTACTGA AGGGCAACAC GCATGA
 
Protein sequence
MRSVMTSKTE RLLPRLFLLI LAGVLALAGW QWHDRSPLSA NLMELVPGTD NDELVVSAEK 
RMQEPLNREM LVLVGHSDRQ KAVELARNLA EQWQSTGLFE KVQWSLQADL PALRTQLLQG
RIAMLPTADR TLLIDDPKTF IEQRVQTLFD PFAGFSLVPG QDDWLGLTGR IQNGLPKQGS
VEADLASGAL VASTEGKSWV LLRSRTRTDA FDMHLPGQVA DLLAQARVQA SQAGGQLLAA
SGLLYAADGQ KQASREITWV GGGATVGILL LLLLAFRRWS VLLAFVPVVV GMLFGAVACV
AIFGSMHVMT LVLGSSLIGV AVDYPQHYLS KSWSLKPWRS WPALRLTLPG LSLSLITSCI
GYLALAWTPF PALTQIAVFS AAGLIGAYLT AVCLLPALLA NVEISPAQWP LKLAQLMLDC
RAALLLRIST PILLVLLLAF CGGGLWHLTT KNDIRQWVAA PQALTDEAQA IARITGYQPT
SQFFLVRGKD QQQLLDRQSE LTQRLDQLVS MDKLQGYMAL NQLLDSPAEQ QATRDALGKL
PQYWAPLVQL GVPASALKAE LAQLQALPTQ DVDQALQGPL SEPWRTLWLG PTRDDNGDQG
VASIVSLRGM NSMALLRVQA IGLEGVQLVD RLGELNEVFA HTQISAAELK LASCVLIVLL
LITPFGFGGA LRIVALPLLA ALCSLASLGW LGQPLTLFSL FGLLLVTAIS VDYAILMREQ
IGGAAVSLLG TLLAALTTWL SFGLLAVSST PAISNFGLSV SLGLAFSFLL APWASPRKAL
HSPATTEGQH A