Gene Psyr_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0427 
Symbol 
ID3365903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp465622 
End bp466356 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID637650767 
Producthypothetical protein 
Protein accessionYP_233535 
Protein GI66043694 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAC CGTTCCTGAG TGACAGTTAT GTCGAGGAAA CCCGCTTCGG CCTGTGGTTT 
CTGCGCAGTA ACATCTGGCA GTACCGCGTG CTGCGCGTGG CGATAGACGA CTTGCGCAGC
CTGTTCGCCA GCGCGCCGCC GGTTGCGCCG GTGTTGCTCG ACGCCGGGTG CGGGCAAGGC
CGCTCGTTCC AGCACCTGAA CAAGGTTTTT CAGCCCTCCA GGCTCATCGG TGTCGACGCC
GACCCGCACA GCCTCGACAT GAGTCGTGAA GAGGCGCGGG CCAGAGGCGT AGAGGTCGAA
CTGATCGGCA GCGACTGCGC AGCCCTGCCA GTACCCGACG CCAGCGTCGA TCTGCTGTTC
TGCCACCAGA CTTTCCATCA TCTGGTCGAT CAGGAACGGG CGCTGGCCGA GTTTTATCGC
GTGCTCAAGC CGGGCGGCTA TCTGCTGTTC GCCGAGTCGA CCGAGGCGTA CATCGACACC
TGGGTGATTC GCTGGCTGTT CCGCCACCCG ATGCACGTTC AGAAAAGCGC GGCGCAGTAT
CTGCAGATGA TCCGCGACCA GGGTTTCGAG TTCGATGCAC AGAATGTTTC GTACCCTTAC
CTGTGGTGGA GCCGCGCCAG GGACTTCGGC CTGCTCGAAG TCTTGAAACT GCAAAAGCCC
AGGCCATTCG GGCAACGTGA GGAAACGCTG GTCAATGTCG TGGCCCGCAA ACCCCTGGAA
GTTGGAGCAT CATGA
 
Protein sequence
MNRPFLSDSY VEETRFGLWF LRSNIWQYRV LRVAIDDLRS LFASAPPVAP VLLDAGCGQG 
RSFQHLNKVF QPSRLIGVDA DPHSLDMSRE EARARGVEVE LIGSDCAALP VPDASVDLLF
CHQTFHHLVD QERALAEFYR VLKPGGYLLF AESTEAYIDT WVIRWLFRHP MHVQKSAAQY
LQMIRDQGFE FDAQNVSYPY LWWSRARDFG LLEVLKLQKP RPFGQREETL VNVVARKPLE
VGAS