| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0416 |
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| Symbol | |
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| ID | 3365892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 454569 |
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| End bp | 455429 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637650756 |
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| Product | helix-turn-helix protein RpiR:sugar isomerase (SIS) |
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| Protein accession | YP_233524 |
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| Protein GI | 66043683 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATTC TGTACCAGAT ACGTGCCCGT CAGGATTCCT TCAGTGCGGG AGAAGGCCGA
ATCGCCAGGC TGTTGCTCAG CGATATCGCC TTCGCGGCCA GTGCCAGTCT GGATGAGCTG
GCCAGCCGCG CCGAGGTCAG CAGTGCGACG CTGTCACGTT TTGCGCGCAG CATCGGTTGC
CGGGATCTGC GCGACTTGCG CCTGCAACTG GCTCAGGCCA GCGGCGTCGG CAGCCGCTTT
TTGCATCCGG AACCGGCGCC GGAGCAGTCG GCCTTTTTCG CCCGGATTGT CGACGACATC
GAAGCCACCC TGCGCCAGCA CCTGGCAGGC TTCGATGCAA CACGCTTTGC CGCCGCCATC
GCCTGCGTCA CCGATGCACG CATGATTCAC ACATTCGGCA TGGGCGGTTG CTCCAGCCTG
TGCAGCGAGG AACTGCAAAC CCGGCTGGTG CGCCTGGGTT ATCCGGTGGC CGCCTGCCGC
GACCCGGTGA TGATGCGCAT GGTCGCCGCT ACGCTTGGCC CGCAACACAG TCTGATTGTC
TGCTCGCTCA GCGGACGCAC GCCGGAACTG CTCGACGCCG TGACCCTGGC GCGCAGCTAC
GGTGCCCGCG TGCTGGCCAT CACCCTGCCT GATTCACCGC TGGCACAACT GGCCGAGGTC
GTGCTGCCGT TACAGATTGC TGAAACCAAT TTCATCTATA AACCCACCGC AGCGCGTTAC
GGCATGCTGC TGACCATCGA TGTGCTGGCC ACTGAACTGG CGCTGTCGAG CCCTGAAGAC
AACCAGGAGC GGCTGCGCCG GATCAAGCTT GCGCTGGATG AATACCGTGG CGGCGAAGAT
GGCCTGCCGC TGGGAGACTG A
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| Protein sequence | MDILYQIRAR QDSFSAGEGR IARLLLSDIA FAASASLDEL ASRAEVSSAT LSRFARSIGC
RDLRDLRLQL AQASGVGSRF LHPEPAPEQS AFFARIVDDI EATLRQHLAG FDATRFAAAI
ACVTDARMIH TFGMGGCSSL CSEELQTRLV RLGYPVAACR DPVMMRMVAA TLGPQHSLIV
CSLSGRTPEL LDAVTLARSY GARVLAITLP DSPLAQLAEV VLPLQIAETN FIYKPTAARY
GMLLTIDVLA TELALSSPED NQERLRRIKL ALDEYRGGED GLPLGD
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