Gene Psyr_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0412 
SymbolgltD 
ID3365888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp446857 
End bp448275 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content61% 
IMG OID637650752 
Productglutamate synthase subunit beta 
Protein accessionYP_233520 
Protein GI66043679 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID[TIGR01318] glutamate synthase small subunit family protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC GTCTCAGTAA CGACTTCCAG TTCATCGACG TCGGACGTAA AGACCCGAAG 
AAGAAACTGC TGCGTCAACG CAAGAAAGAG TTCGTGGAAA TCTACGAGCC TTTCAAGCCC
CAGCAGTCCG CCGATCAGGC GCACCGCTGC CTGGGTTGCG GCAACCCGTA CTGCGAATGG
AAGTGCCCGG TGCACAACTT CATTCCCAAC TGGCTCAAGC TGGTCGCCGA GGGCAATATC
CTCGCGGCAG CGGAATTGTC GCACCAGACC AACACCCTGC CGGAAGTCTG CGGCCGCGTG
TGCCCGCAGG ATCGCCTGTG TGAAGGTGCC TGCACACTGA ACGACGGTTT CGGTGCGGTG
ACCATCGGGT CGGTCGAGAA GTACATCACC GATACCGCCT TTGCCATGGG CTGGCGTCCG
GACATGTCCA AGGTCGTGCC GACCGGCAAG CGCGTCGCGA TCATCGGCGC AGGGCCTGCG
GGCCTGGGCT GTGCCGACGT GCTGGTGCGT GGCGGCGTAA CCCCGGTGGT GTTCGACAAG
AATCCGGAAA TCGGCGGTCT GCTGACCTTC GGCATTCCGG AATTCAAGCT GGAGAAATCC
GTGCTGAGCC ATCGCCGTGA AGTGTTCACC GGCATGGGCA TCGAATTCCG TCTCAACACC
GAAGTCGGCA AGGATGTCAC CATCGATCAA CTGCTCGCAG AATACGATGC GGTGTTCATG
GGCATGGGCA CCTACACCTA CATGAAAGGC GGCTTCCCCG GTGAGGATCT GCCAGGCGTG
CACGATGCGC TCGACTTCCT GATCGCCAAC GTCAACCGCA ACCTGGGCTT TGAAAAGGCC
CCGGAAGACT TCGTCGACAT GAAGGGCAAG CGGGTCGTGG TTCTGGGCGG TGGCGACACG
GCGATGGACT GCAACCGCAC CTCTATCCGC CAGGGCGCCA AGTCAGTGAC CTGCGCCTAC
CGTCGCGACG AAGAAAACAT GCCTGGCTCG CGCAAGGAAG TGAAAAACGC CAAGGAAGAA
GGCGTGAAGT TCCTCTACAA CCGTCAGCCG ATCGCCATCA TCGGCGAGGG CAAGGTTGAA
GGCGTGAAAG TGGTCGAGAC GCGCCTGGGC GAACCGGATG CCCGTGGTCG TCGCAGTCCC
GAGCCTATTC CGGGCTCCGA AGAGATCATC CCGGCAGAAG CCGTGGTCAT CGCCTTCGGC
TTCCGCCCAA GCCCGGCACC CTGGTTCGAG CAGTTCACCA TCAGCACCGA CAGCCAGGGC
CGTGTCGTGG CCCCGGAACA GGCGCAGTAC AAGCACCAGA CCAGCAACCC GAAGATCTTC
GCCGGTGGCG ACATGGTGCG CGGCTCCGAC CTGGTGGTGA CCGCTATCTT CGAAGGCCGT
AATGCGGCTG AAGGGATTCT GGATTACCTG GGCGTCTGA
 
Protein sequence
MAERLSNDFQ FIDVGRKDPK KKLLRQRKKE FVEIYEPFKP QQSADQAHRC LGCGNPYCEW 
KCPVHNFIPN WLKLVAEGNI LAAAELSHQT NTLPEVCGRV CPQDRLCEGA CTLNDGFGAV
TIGSVEKYIT DTAFAMGWRP DMSKVVPTGK RVAIIGAGPA GLGCADVLVR GGVTPVVFDK
NPEIGGLLTF GIPEFKLEKS VLSHRREVFT GMGIEFRLNT EVGKDVTIDQ LLAEYDAVFM
GMGTYTYMKG GFPGEDLPGV HDALDFLIAN VNRNLGFEKA PEDFVDMKGK RVVVLGGGDT
AMDCNRTSIR QGAKSVTCAY RRDEENMPGS RKEVKNAKEE GVKFLYNRQP IAIIGEGKVE
GVKVVETRLG EPDARGRRSP EPIPGSEEII PAEAVVIAFG FRPSPAPWFE QFTISTDSQG
RVVAPEQAQY KHQTSNPKIF AGGDMVRGSD LVVTAIFEGR NAAEGILDYL GV