Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0412 |
Symbol | gltD |
ID | 3365888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 446857 |
End bp | 448275 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637650752 |
Product | glutamate synthase subunit beta |
Protein accession | YP_233520 |
Protein GI | 66043679 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAC GTCTCAGTAA CGACTTCCAG TTCATCGACG TCGGACGTAA AGACCCGAAG AAGAAACTGC TGCGTCAACG CAAGAAAGAG TTCGTGGAAA TCTACGAGCC TTTCAAGCCC CAGCAGTCCG CCGATCAGGC GCACCGCTGC CTGGGTTGCG GCAACCCGTA CTGCGAATGG AAGTGCCCGG TGCACAACTT CATTCCCAAC TGGCTCAAGC TGGTCGCCGA GGGCAATATC CTCGCGGCAG CGGAATTGTC GCACCAGACC AACACCCTGC CGGAAGTCTG CGGCCGCGTG TGCCCGCAGG ATCGCCTGTG TGAAGGTGCC TGCACACTGA ACGACGGTTT CGGTGCGGTG ACCATCGGGT CGGTCGAGAA GTACATCACC GATACCGCCT TTGCCATGGG CTGGCGTCCG GACATGTCCA AGGTCGTGCC GACCGGCAAG CGCGTCGCGA TCATCGGCGC AGGGCCTGCG GGCCTGGGCT GTGCCGACGT GCTGGTGCGT GGCGGCGTAA CCCCGGTGGT GTTCGACAAG AATCCGGAAA TCGGCGGTCT GCTGACCTTC GGCATTCCGG AATTCAAGCT GGAGAAATCC GTGCTGAGCC ATCGCCGTGA AGTGTTCACC GGCATGGGCA TCGAATTCCG TCTCAACACC GAAGTCGGCA AGGATGTCAC CATCGATCAA CTGCTCGCAG AATACGATGC GGTGTTCATG GGCATGGGCA CCTACACCTA CATGAAAGGC GGCTTCCCCG GTGAGGATCT GCCAGGCGTG CACGATGCGC TCGACTTCCT GATCGCCAAC GTCAACCGCA ACCTGGGCTT TGAAAAGGCC CCGGAAGACT TCGTCGACAT GAAGGGCAAG CGGGTCGTGG TTCTGGGCGG TGGCGACACG GCGATGGACT GCAACCGCAC CTCTATCCGC CAGGGCGCCA AGTCAGTGAC CTGCGCCTAC CGTCGCGACG AAGAAAACAT GCCTGGCTCG CGCAAGGAAG TGAAAAACGC CAAGGAAGAA GGCGTGAAGT TCCTCTACAA CCGTCAGCCG ATCGCCATCA TCGGCGAGGG CAAGGTTGAA GGCGTGAAAG TGGTCGAGAC GCGCCTGGGC GAACCGGATG CCCGTGGTCG TCGCAGTCCC GAGCCTATTC CGGGCTCCGA AGAGATCATC CCGGCAGAAG CCGTGGTCAT CGCCTTCGGC TTCCGCCCAA GCCCGGCACC CTGGTTCGAG CAGTTCACCA TCAGCACCGA CAGCCAGGGC CGTGTCGTGG CCCCGGAACA GGCGCAGTAC AAGCACCAGA CCAGCAACCC GAAGATCTTC GCCGGTGGCG ACATGGTGCG CGGCTCCGAC CTGGTGGTGA CCGCTATCTT CGAAGGCCGT AATGCGGCTG AAGGGATTCT GGATTACCTG GGCGTCTGA
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Protein sequence | MAERLSNDFQ FIDVGRKDPK KKLLRQRKKE FVEIYEPFKP QQSADQAHRC LGCGNPYCEW KCPVHNFIPN WLKLVAEGNI LAAAELSHQT NTLPEVCGRV CPQDRLCEGA CTLNDGFGAV TIGSVEKYIT DTAFAMGWRP DMSKVVPTGK RVAIIGAGPA GLGCADVLVR GGVTPVVFDK NPEIGGLLTF GIPEFKLEKS VLSHRREVFT GMGIEFRLNT EVGKDVTIDQ LLAEYDAVFM GMGTYTYMKG GFPGEDLPGV HDALDFLIAN VNRNLGFEKA PEDFVDMKGK RVVVLGGGDT AMDCNRTSIR QGAKSVTCAY RRDEENMPGS RKEVKNAKEE GVKFLYNRQP IAIIGEGKVE GVKVVETRLG EPDARGRRSP EPIPGSEEII PAEAVVIAFG FRPSPAPWFE QFTISTDSQG RVVAPEQAQY KHQTSNPKIF AGGDMVRGSD LVVTAIFEGR NAAEGILDYL GV
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