| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0409 |
|---|
| Symbol | aroB |
|---|
| ID | 3365885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 439198 |
|---|
| End bp | 440301 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637650749 |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | YP_233517 |
|---|
| Protein GI | 66043676 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0337] 3-dehydroquinate synthetase |
|---|
| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAC TTAAGGTCGA GCTTGGTGAG CGTAGCTACC CGATCCATAT TGGCGAAGGC
CTGCTGGATC AGCCAGAGCT CCTGACCCCG CATATCGTCG GGCGTCAGGT GGCTATCGTT
TCCAACACGA CAGTGGCACC GCTGTACCTG GAACGCCTGA CGCAAACCCT GGCCGGTTAC
AACGTTCTGC CGATTGTTCT GCCCGATGGC GAGGCGTTCA AGAACTGGGA GACCCTGCAG
ACCATTTTCG ATGGCCTGCT GACCGCCCGT CATGATCGTC GTACCACGGT CATCGCCCTG
GGTGGCGGGG TGATCGGCGA CATGGCCGGG TTCGCTGCCG CCTGCTATCA GCGTGGCGTG
AACTTCATCC AGATCCCGAC CACGCTGCTG TCTCAGGTGG ACTCGTCGGT CGGCGGCAAG
ACCGGCATCA ACCACCCGCT GGGCAAGAAC ATGGTCGGTG CCTTCTATCA GCCGAGTGTG
GTGCTGATCG ATACCGCCTC GCTCAATACT CTGCCCGAGC GCGAGCTGTC CGCCGGGCTG
GCGGAAGTCA TCAAGTACGG CCTGATCTGC GACGAACCCT TTCTGACCTG GCTCGAAGAG
CACGTCGATG CACTGCGCGG GCTGGACCAG GCGGCGCTGA CCGTGGCCAT CGAACGTTCC
TGCGCCGCCA AGGCGCTGGT GGTCGGCGCC GATGAGCGCG AGTCCGGTGT TCGTGCGACA
TTGAACCTGG GTCACACATT CGGGCACGCC ATCGAGACGC ATATGGGCTA TGGTGTCTGG
CTGCATGGCG AGGCGGTTGC TGCCGGTACG GTCATGGCGC TGGAAATGTC CTCGCGCCTG
GGCTGGATCA GCACGCAGGA GCGGGATCGC GGCATTCGCC TGTTTCAGCG TGCCGGGCTG
CCGGTCGTGC CGCCGCAGGA CATGACGCAA GACAATTTCC TCGAACACAT GGCGATCGAC
AAGAAAGTCA TCGACGGTCG CTTGCGTCTG GTGCTGTTGC GCCGGATGGG TGAAGCGGTT
ATCACGGACG AATATCCAAA AGAAGTATTA CAGGCCACTC TGGTTGCGGA TTATCGCGCC
CTGGTGGATC AGCTCAGAGG TTAA
|
|---|
| Protein sequence | MQTLKVELGE RSYPIHIGEG LLDQPELLTP HIVGRQVAIV SNTTVAPLYL ERLTQTLAGY
NVLPIVLPDG EAFKNWETLQ TIFDGLLTAR HDRRTTVIAL GGGVIGDMAG FAAACYQRGV
NFIQIPTTLL SQVDSSVGGK TGINHPLGKN MVGAFYQPSV VLIDTASLNT LPERELSAGL
AEVIKYGLIC DEPFLTWLEE HVDALRGLDQ AALTVAIERS CAAKALVVGA DERESGVRAT
LNLGHTFGHA IETHMGYGVW LHGEAVAAGT VMALEMSSRL GWISTQERDR GIRLFQRAGL
PVVPPQDMTQ DNFLEHMAID KKVIDGRLRL VLLRRMGEAV ITDEYPKEVL QATLVADYRA
LVDQLRG
|
|---|
| |