Gene Psyr_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0405 
Symbol 
ID3365881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand+ 
Start bp435260 
End bp435883 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID637650745 
Productpilus assembly protein, PilO 
Protein accessionYP_233513 
Protein GI66043672 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3167] Tfp pilus assembly protein PilO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.909088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGT CCGAATGGCT GGAAGGGCTG CGCAAGGTCG ATCTGAGCGA ACTGGACCTG 
AACAATCTCG GTTCATGGCC TGCGGCGATC AAGGCCATTG CCGGGGTGCT GGTCGCGGTC 
ATGATTTTCG CTCTGGGCTA TTTCTTCTTT ATCCAGGATC TGGAAACCCA GCTGGAAAGC 
GCGCAGGGCA GCGAGGTGAC GCTCAAGGAG CAGTTCTCCA ACAAGGCCTT CCAGGCGGCC 
AACCTCGAGC CGTACAAGAA GCAGATGGAA GAAATGGAAA ACACCTTCGG TGCCCTGCTG 
CGGCAATTGC CCAGCGACAC CGAAGTGCCT GGGCTGCTTG AGGACATCAC CCGCACCGGA 
CTGGGAAGCG GGCTCGAGTT CGAGGAAATC AAGCTGCTGC CCGAGGCGGC CCAGCAGTTC 
TACATCGAGC TGCCGATACA GATCACCGTG GTCGGTGGTT ATCACGACCT GGCGACCTTC 
GTCAGCGGCG TCGCCAGCCT GCCGCGCATC GTCACGCTGC ATGATTTCGA AATCAAGCCG 
GTCGATCCCA AGGTGCCGAC CAAGTTGCGC ATGAGCATTC TGGCCAAGAC CTACCGCTAC 
AACGATGAAG GGCTGAAGAA ATGA
 
Protein sequence
MNMSEWLEGL RKVDLSELDL NNLGSWPAAI KAIAGVLVAV MIFALGYFFF IQDLETQLES 
AQGSEVTLKE QFSNKAFQAA NLEPYKKQME EMENTFGALL RQLPSDTEVP GLLEDITRTG 
LGSGLEFEEI KLLPEAAQQF YIELPIQITV VGGYHDLATF VSGVASLPRI VTLHDFEIKP 
VDPKVPTKLR MSILAKTYRY NDEGLKK