Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0395 |
Symbol | |
ID | 3365871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 422031 |
End bp | 422561 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637650735 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_233503 |
Protein GI | 229170803 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCACCA TCGTTTCAGT GCGCCGCCAC GGTAAAGTCG TCATGGCTGG CGACGGCCAG GTTTCTCTGG GCAACACCGT CATGAAAGGC AACGCCAAGA AGGTACGCCG CCTGTATCAC GGTGAAGTGA TCGCCGGATT CGCTGGCGCG ACCGCCGATG CATTCACGCT GTTCGAACGC TTCGAGGCCC AACTGGAAAA ACACCAGGGG CATCTGGTTC GTGCAGCCGT CGAACTGGCC AAGGACTGGC GCACCGATCG CTCGCTGAGC CGCCTTGAAG CCATGCTGGC CGTCGCCAAC AAGGACGCCT CGCTGATCAT CACCGGCAAC GGTGACGTGG TCGAGCCCGA GGACGGACTG ATCGCCATGG GCTCCGGCGG CGCATTCGCT CAGGCCGCAG CACGCGCCCT GCTGCTCAAG ACCGACCTGT CGGCCCGCGA AATTGCCGAG ACTTCCCTGC ATATCGCCGG CGACATTTGC GTGTTCACCA ACCACAACAT CACCATTGAG GAGCAGGACC TCGCCGGCTA A
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Protein sequence | MTTIVSVRRH GKVVMAGDGQ VSLGNTVMKG NAKKVRRLYH GEVIAGFAGA TADAFTLFER FEAQLEKHQG HLVRAAVELA KDWRTDRSLS RLEAMLAVAN KDASLIITGN GDVVEPEDGL IAMGSGGAFA QAAARALLLK TDLSAREIAE TSLHIAGDIC VFTNHNITIE EQDLAG
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