Gene Psyr_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0395 
Symbol 
ID3365871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp422031 
End bp422561 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content62% 
IMG OID637650735 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_233503 
Protein GI229170803 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCACCA TCGTTTCAGT GCGCCGCCAC GGTAAAGTCG TCATGGCTGG CGACGGCCAG 
GTTTCTCTGG GCAACACCGT CATGAAAGGC AACGCCAAGA AGGTACGCCG CCTGTATCAC
GGTGAAGTGA TCGCCGGATT CGCTGGCGCG ACCGCCGATG CATTCACGCT GTTCGAACGC
TTCGAGGCCC AACTGGAAAA ACACCAGGGG CATCTGGTTC GTGCAGCCGT CGAACTGGCC
AAGGACTGGC GCACCGATCG CTCGCTGAGC CGCCTTGAAG CCATGCTGGC CGTCGCCAAC
AAGGACGCCT CGCTGATCAT CACCGGCAAC GGTGACGTGG TCGAGCCCGA GGACGGACTG
ATCGCCATGG GCTCCGGCGG CGCATTCGCT CAGGCCGCAG CACGCGCCCT GCTGCTCAAG
ACCGACCTGT CGGCCCGCGA AATTGCCGAG ACTTCCCTGC ATATCGCCGG CGACATTTGC
GTGTTCACCA ACCACAACAT CACCATTGAG GAGCAGGACC TCGCCGGCTA A
 
Protein sequence
MTTIVSVRRH GKVVMAGDGQ VSLGNTVMKG NAKKVRRLYH GEVIAGFAGA TADAFTLFER 
FEAQLEKHQG HLVRAAVELA KDWRTDRSLS RLEAMLAVAN KDASLIITGN GDVVEPEDGL
IAMGSGGAFA QAAARALLLK TDLSAREIAE TSLHIAGDIC VFTNHNITIE EQDLAG