Gene Psyr_0391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0391 
Symbol 
ID3365867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp419054 
End bp419746 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID637650731 
ProductPoly granule associated 
Protein accessionYP_233499 
Protein GI66043658 
COG category[S] Function unknown 
COG ID[COG3937] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01837] poly(hydroxyalkanoate) granule-associated protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCA AGAAAAAAAC CGAAAAAGAT GGCAGCTCCT GGATGGGCGA GGTTGAGAAG 
TACTCTCGTC AGATCTGGCT GGCTGGTTTG GGCGCGTATT CCAAAATCAG CAATGACGGC
AGCAAGCTTT TCGAGACGCT GGTGAAGGAC GGCGAGAAGG CCGAGAAGCT GACCAAGGTC
GAAGCGCAGA AGCAGCTCGA TGACGTCAAG AACACCAGCA AGTCGGCCAA GTCCCGCGTA
GACGACGTCA AAGACCTTGC GGTTGGCAAG TGGAACGAGC TGGAAGAGGC TTTCGACAAG
CGTCTGAATG GCGCGATTGC GCGCCTGGGT GTGCCGAGCC GCAGTGAAGT ACAGGCGCTG
AACAGCAAGG TCGACCAGCT GACCCGACAG ATCGAGCTAC TGACGGGCGC GAAAGCCAGA
CCGGCTGCTT CGCGCACTGT GGCGGCCAAA CCGGCAGCGA CGAAGAGCGC GGCGAAACCG
TTGGTCAAGG CTGCGCCCAA GCCAGCCGTC AAGAAAGCAG CGGCCATGCC CGTCGAGGCT
GCCAAAAAGC CTGCCGCTAC GAGCACCCGC AAAACCAGCA CCGCGACCAA AACTGCAGCA
GCGAAAAAAC CAGCGACAAG AAAGCCGGCG GCCAAACCTG CTACCAAGCC CCCTACGCCG
GCCGTGCCGG AAAAACCAGC GATTCAGTCC TGA
 
Protein sequence
MAGKKKTEKD GSSWMGEVEK YSRQIWLAGL GAYSKISNDG SKLFETLVKD GEKAEKLTKV 
EAQKQLDDVK NTSKSAKSRV DDVKDLAVGK WNELEEAFDK RLNGAIARLG VPSRSEVQAL
NSKVDQLTRQ IELLTGAKAR PAASRTVAAK PAATKSAAKP LVKAAPKPAV KKAAAMPVEA
AKKPAATSTR KTSTATKTAA AKKPATRKPA AKPATKPPTP AVPEKPAIQS