Gene Psyr_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0378 
Symbol 
ID3365854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp403976 
End bp406558 
Gene Length2583 bp 
Protein Length860 aa 
Translation table11 
GC content62% 
IMG OID637650718 
Productglucosyltransferase MdoH 
Protein accessionYP_233486 
Protein GI66043645 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2943] Membrane glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATT CTCTACCGGT GCCAATGTCT CTGAACGAGT ACCTGGCGCA TTTACCGATG 
AGCGACGAGC AGCGGGCAGA ACTTGCCGGC TGCACGACCT TCGCCGAGTT GCATGAGCGA
CTTTCCGCGC AGCCGGTCAC TGACCCTGCC GAGGCCGCTC AGGCTTCGGT GGGTCGCCGT
CTGACGCTGA CTACCGCAGA TCAGCTGGAG GACGCCGAGA TGCTCGGCGT CGATGCCAGC
GGTCGCCTGT GCCTGAAGGC CACACCACCG ATTCGCCGGA CCAAGGTCGT GCCAGAGCCA
TGGCGCACCA ACATCCTGGT GCGCGGCTGG CGTCGCCTGA CCGGCAAGGG CAACCCGCCC
AAGCCCGAGC ACGATGATCT GCCGCGGGAT CTGCCGAAGG CGCGCTGGCG TACCGTCGGT
TCGATCCGTC GCTACATCCT GCTGATCCTC ATGCTGGGTC AGACGATCGT GGCTGGCTGG
TACATGAAAG GCATTCTGCC GTATCAGGGC TGGTCGCTGG TTTCGCTCGA CGAAATCACC
CGTCAGACCT TCGTGCAGAC CGCCTTGCAG GTCATGCCTT ATGCCTTGCA GACCAGTATC
CTGTTGTTGT TCGGGATTCT GTTCTGCTGG GTATCGGCCG GTTTCTGGAC CGCGCTGATG
GGCTTCCTGG AACTGCTCAC CGGTCGCGAC AAATACCGCA TCTCGGGTGC CAGTGCCGGC
AACGAGCCGA TCGAAAAGGG CGCACGTACT GCGCTGGTCA TGCCGATCTG CAACGAAGAC
GTGCCTCGGG TTTTCGCCGG TCTGCGCGCT ACGTTCGAAT CGGTAGCGGC CACGGGTGAC
CTGGATCGTT TCGATTTCTT CGTGCTCAGT GACACCAACG AAACCGACAT CGCCGTTGCC
GAGCAACAGG CGTGGCTGGA CGTGTGCCGC GAGACCAAAG GCTTCGGCAA GATCTTCTAC
CGTCGTCGTC GCCGTCGCGT AAAACGCAAA AGCGGCAACC TCGACGACTT CTGCCGGCGC
TGGGGCGGTG ACTACCGCTA CATGGTCGTG CTGGACGCCG ACAGCGTCAT GAGCGGTGAG
TGTCTGACCA GTCTGGTTCG CCTGATGGAA GCCACGCCGG ACGCCGGTAT CATCCAGACC
GCGCCACGTG CGTCGGGCAT GGACACGCTG TATGCACGCA TGCAGCAGTT CGCTACCCGG
GTCTATGGTC CGCTGTTCAC TGCCGGTCTG CACTTCTGGC AGCTGGGTGA ATCCCACTAT
TGGGGTCACA ACGCGATCAT CCGCATGAAG CCCTTCATCG AGCACTGCGC CCTGGCGCCG
CTGCCCGGCA AAGGCGCATT CGCCGGTGCG ATCCTCTCCC ACGACTTCGT CGAAGCTGCG
CTGATGCGCC GTGCCGGCTG GGGCGTGTGG ATTGCCTACG ACCTGCCAGG CAGTTACGAA
GAGTTGCCGC CTAACCTGCT GGACGAACTC AAGCGTGACC GTCGCTGGTG CCACGGCAAC
CTGATGAACT TCAGGCTGTT CCTGGTCAAG GGCATGCACC CGGTTCACCG TGCGGTGTTC
CTGACCGGTG TGATGTCTTA CCTGTCGGCA CCGTTGTGGT TCTTCTTCCT CGTGCTGTCC
ACGGCTTTGC TGGCGGTGAA CACGCTGATG GAGCCGACCT ACTTCCTTGA ACCGCGTCAG
CTGTACCCGC TGTGGCCACA ATGGCACCCA GAAAAAGCCG TTGCGTTGTT CTCGACCACC
ATCGTCCTGC TGTTCCTGCC TAAACTGCTC AGCGTCATTC TGATCTGGGC CAAGGGCGCG
AAAGGCTTCG GTGGCAAGTT CAAGGTCACC GTTTCGATGC TGCTGGAAAT GCTCTTCTCG
GTGCTGCTGG CTCCGGTGCG CATGCTGTTC CACACACGCT TCGTACTGGC CGCGTTCCTG
GGCTGGGCCG CGACCTGGAA CTCGCCGCAA CGCGACGATG ACTCCACGCC GTGGATCGAA
GCGGTGAAGC GTCATGGTCC GCAAACCCTG CTGGGCGCGT GCTGGGCCTT GCTGGTGTTC
TGGTTGAACC CGAGCTTCCT GTGGTGGCTT GCGCCGATCG TGGTGTCGTT GATGCTGTCG
ATTCCGGTGT CGGTGATTTC CAGCCGTACC AATCTGGGCG TCAAGGCGCG TGACGAGAAG
TTCTTCCTGA TTCCTGAAGA GTTCGAGCCG CCGCAAGAGC TGATCTCGAC GGATCGGTAC
ACCTACGAGA ACCGCTGGCA TGCGCTGAAG CAGGGCTTCA TCCGCGCTGT GGTCGACCCG
CGCCAGAACG CCCTGGCCTG CGCCCTGGCG ACGTCGCGTC ACCGTCAGGC TCAGCCGATT
GAAGTGGTGC GTATGGAGCG TGTCGATCAG GCACTCAAGG TCGGTCCGGC AAAACTCGGC
AATCAGGAAC GCCTGATGCT GCTGAGCGAC CCGGTCGCCC TTGGCCGCTT GCACGAGCGC
GTCTGGAGCG AAGGTCACGA AGAGTGGCTG GCCGCGTGGA GAGCTTCCAT CGAAGCCGAT
CCACATGCGC CTCTGCTGCC TTTGCAGCCT GAAGGTAAAG CATCGGAGCC GGTTCCGGTC
TAA
 
Protein sequence
MSNSLPVPMS LNEYLAHLPM SDEQRAELAG CTTFAELHER LSAQPVTDPA EAAQASVGRR 
LTLTTADQLE DAEMLGVDAS GRLCLKATPP IRRTKVVPEP WRTNILVRGW RRLTGKGNPP
KPEHDDLPRD LPKARWRTVG SIRRYILLIL MLGQTIVAGW YMKGILPYQG WSLVSLDEIT
RQTFVQTALQ VMPYALQTSI LLLFGILFCW VSAGFWTALM GFLELLTGRD KYRISGASAG
NEPIEKGART ALVMPICNED VPRVFAGLRA TFESVAATGD LDRFDFFVLS DTNETDIAVA
EQQAWLDVCR ETKGFGKIFY RRRRRRVKRK SGNLDDFCRR WGGDYRYMVV LDADSVMSGE
CLTSLVRLME ATPDAGIIQT APRASGMDTL YARMQQFATR VYGPLFTAGL HFWQLGESHY
WGHNAIIRMK PFIEHCALAP LPGKGAFAGA ILSHDFVEAA LMRRAGWGVW IAYDLPGSYE
ELPPNLLDEL KRDRRWCHGN LMNFRLFLVK GMHPVHRAVF LTGVMSYLSA PLWFFFLVLS
TALLAVNTLM EPTYFLEPRQ LYPLWPQWHP EKAVALFSTT IVLLFLPKLL SVILIWAKGA
KGFGGKFKVT VSMLLEMLFS VLLAPVRMLF HTRFVLAAFL GWAATWNSPQ RDDDSTPWIE
AVKRHGPQTL LGACWALLVF WLNPSFLWWL APIVVSLMLS IPVSVISSRT NLGVKARDEK
FFLIPEEFEP PQELISTDRY TYENRWHALK QGFIRAVVDP RQNALACALA TSRHRQAQPI
EVVRMERVDQ ALKVGPAKLG NQERLMLLSD PVALGRLHER VWSEGHEEWL AAWRASIEAD
PHAPLLPLQP EGKASEPVPV