| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0376 |
|---|
| Symbol | |
|---|
| ID | 3365852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 401354 |
|---|
| End bp | 401791 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637650716 |
|---|
| Product | D-tyrosyl-tRNA(Tyr) deacylase |
|---|
| Protein accession | YP_233484 |
|---|
| Protein GI | 66043643 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1490] D-Tyr-tRNAtyr deacylase |
|---|
| TIGRFAM ID | [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTT TGTTGCAGCG CGTGCGAAGT GCGCGCGTCG AGGTGGGCAC CGAGGTCGTG
GGCGCCATTG AACAGGGCAT ATTGGTGTTG GTGGGAATAG AGCCTCAAGA CACCCGCGCC
AGTGCCGATA AGTTGCTGCA CAAGTTGCTC AATTATCGAG TGTTCAGCGA TGTTGAGGGC
AAGATGAATC TGTCCTTGCG TGAGGTGGGG GGCGGCCTGT TGCTGGTTTC CCAGTTCACG
CTGGCTGCGG ACACCAAAAG CGGGTTGCGT GCGGGCTTCT CGAAAGCCGC GCCTCCAGCA
CTGGGCGCCG AGCTGTTCGA CTATCTGTTG AGCCAGGCCA GAATCGCGCA TCCCACGGTA
GCTGCGGGCC AGTTTGGTGC AGACATGCAG GTGCACCTGA TAAATGATGG CCCCGTGACA
TTTTTGTTTG ATACATAA
|
|---|
| Protein sequence | MKGLLQRVRS ARVEVGTEVV GAIEQGILVL VGIEPQDTRA SADKLLHKLL NYRVFSDVEG
KMNLSLREVG GGLLLVSQFT LAADTKSGLR AGFSKAAPPA LGAELFDYLL SQARIAHPTV
AAGQFGADMQ VHLINDGPVT FLFDT
|
|---|
| |