| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0375 |
|---|
| Symbol | |
|---|
| ID | 3365851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 400343 |
|---|
| End bp | 401314 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637650715 |
|---|
| Product | peptidase S33, proline iminopeptidase 1 |
|---|
| Protein accession | YP_233483 |
|---|
| Protein GI | 66043642 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACTT TGTACCCGCA GATCAAACCC TACGCCCGGC ACGATCTGGC CGTGGAACAA
CCGCATGTGC TTTACGTCGA TGAGAGTGGC TCGCCAGAAG GCTTGCCGGT GGTGTTTATC
CACGGCGGGC CGGGTTCGGG ATGCGATGCG CACAGTCGCT GCTATTTCGA TCCCAACCTG
TACCGCATTG TCACGTTCGA CCAGCGCGGC TGCGGTCGTT CCACACCGCA TGCCAGCCTT
GAAAACAACA CCACCTGGAA ACTGGTGGAA GACCTTGAAG CGATTCGCGA GCACCTCGGG
ATCGACAAAT GGGTGTTGTT CGGCGGTTCG TGGGGTTCGA CCCTCGCTCT GGCCTATGCA
CAGACCCATC CCGACCGCGT GCACGCGATG ATCCTGCGTG GCGTATTCCT TGCCCGTCAG
CAGGAAATCG ACTGGTTCTA TCAGGCCGGC GCCAGCCGTC TGTTTCCGGA CTATTGGCAG
GATTATGTCG CGCCGATCCC GCTGGACGAG CGTGACAACA TTCTGGCTGC CTTCCACAAG
CGACTCACCG GTCCGGACCA GATCGCCCAG ATGCACGCTG CCAAGGCCTG GTCGACCTGG
GAAGGGCGCT GCGCAACCCT GCGGCCCAAT CCGCAAGTGG TCGATCGCTT TGCCGAGCCG
CACCGCGCGT TGTCCATCGC GCGCATCGAA TGTCACTACT TCATGAACAA CGCCTTTCTG
GAAGACAACC AGCTGATTCG CGACATGCCG AAGATCGCGC ACCTGCCGGC AATCATCGTC
CACGGTCGTT ACGATGTCAT CTGTCCGCTG GATAATGCAT GGGAGCTGCA CCAGAACTGG
CCTGGCAGTG AACTGCAGGT GATTCGCGAG GCCGGGCATT CGGCAGCCGA GCCGGGTATC
GCCGACGCGC TGGTGCGTGC TGCCGCAGAA GTGGCGCGCA ATCTGCTCGA CCTGCCGCCC
GAAGAGGCGT GA
|
|---|
| Protein sequence | MQTLYPQIKP YARHDLAVEQ PHVLYVDESG SPEGLPVVFI HGGPGSGCDA HSRCYFDPNL
YRIVTFDQRG CGRSTPHASL ENNTTWKLVE DLEAIREHLG IDKWVLFGGS WGSTLALAYA
QTHPDRVHAM ILRGVFLARQ QEIDWFYQAG ASRLFPDYWQ DYVAPIPLDE RDNILAAFHK
RLTGPDQIAQ MHAAKAWSTW EGRCATLRPN PQVVDRFAEP HRALSIARIE CHYFMNNAFL
EDNQLIRDMP KIAHLPAIIV HGRYDVICPL DNAWELHQNW PGSELQVIRE AGHSAAEPGI
ADALVRAAAE VARNLLDLPP EEA
|
|---|
| |