Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0364 |
Symbol | nhaA |
ID | 3365840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 388591 |
End bp | 389766 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637650706 |
Product | pH-dependent sodium/proton antiporter |
Protein accession | YP_233474 |
Protein GI | 66043633 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAG TTCCGAACCG GGAAACGCCC AGAGGCATTG CCATCCTCGC CCGCTTCCTC GCCTCCGAAT CAGCCGGCGG CATCGTGTTG ATGGTGGCTG CGCTGGCGGC CTTGATCGTT GCCAACTCGC CGCTTTCTGC CGGCTATTTC TCGATCCTGC ACAGCGTCTG GCTGGGTCTC TCGGTCGAGC TGTGGATCAA CGACGGGCTG ATGGCGATCT TCTTCCTGAT GGTCGGCCTG GAGATCAAGC GTGAAGTCCT CGCCGGTGGT CTGGCGAGCT GGGGGCAACG TGCCCTGCCC GGCTTTGCGG CGGCCGGCGG CATGCTGGTG CCGGCGCTGA TCTACATCGC GATCAATTGG GGTAATCCGC AGACCCTGAG CGGCTGGGCG ATCCCGGCAG CCACCGACAT CGCCTTCGCC CTCGGCGTGC TGTCGCTGCT CGGCAATCGG GTGCCGACCT CGCTGAAGGT CTTTCTGGCC GCACTTGCGA TCCTCGACGA TCTGGGCGCC GTGACCATCA TCGCCTTCTT TTACAGCGCC GGTCTGAACC TGCCGATGCT GGCCGCCGCC TTCGTGACAC TGGCGGTGCT GATCGTCATG AACCGTTTGA ACGTGCGTCG TTTGCTGCCC TATCTGCTGC TTGGCGCGCT GCTGTGGTTC TTCGTCCTGC AATCGGGCGT ACACGCCACG CTGGCCGGTG TCGCCCTGGC GCTGTGCATC CCGATGGGCA AGCCCGAGGA AGAAGCCCGC TCGCCACTGC TGTTCCTCGA AGAAAAGATG CACTACTGGG TGGCCTTCGC CGTGGTGCCG ATCTTTGGTT TTGCCAACGC TGGCGTTTCG CTGGCTGGCA TTACTCTGGG CAATCTGGTC GATCCTGTGC CGCTGGGCGT TGCGCTGGGG CTGTTCGTGG GCAAGCAGAT CGGCGTGTTT CTCGCCGCCG TGCTGGCCAT CCGCGCCGGG CTGGCGGTAT TGCCGGAAGG CAGCAACTGG GTGCAACTGT ACGGCGTGGC GATGCTGTGC GGCATCGGTT TCACCATGAG CCTGTTCATC GGCAACCTGG CGTTCCCCGG CTCGCAACAC CTGATCGACG AGGTGAAGGT CGGCGTACTG ATCGGCTCGG GGCTGGCCGC AATTGCCGGA ATTGTGTTGC TGCGCAGCCG TTTCAGCAGG CCCTGA
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Protein sequence | MTQVPNRETP RGIAILARFL ASESAGGIVL MVAALAALIV ANSPLSAGYF SILHSVWLGL SVELWINDGL MAIFFLMVGL EIKREVLAGG LASWGQRALP GFAAAGGMLV PALIYIAINW GNPQTLSGWA IPAATDIAFA LGVLSLLGNR VPTSLKVFLA ALAILDDLGA VTIIAFFYSA GLNLPMLAAA FVTLAVLIVM NRLNVRRLLP YLLLGALLWF FVLQSGVHAT LAGVALALCI PMGKPEEEAR SPLLFLEEKM HYWVAFAVVP IFGFANAGVS LAGITLGNLV DPVPLGVALG LFVGKQIGVF LAAVLAIRAG LAVLPEGSNW VQLYGVAMLC GIGFTMSLFI GNLAFPGSQH LIDEVKVGVL IGSGLAAIAG IVLLRSRFSR P
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