Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0358 |
Symbol | |
ID | 3365834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 383399 |
End bp | 384196 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637650700 |
Product | cystine transporter subunit |
Protein accession | YP_233468 |
Protein GI | 66043627 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.95727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATTT CCGCTATTCG TCGTACGTTT CTTTTTTCGG CAATGGGCTT GATGCTCAGT GCCGGTATCG CCGGGCAAGC CATGGCTGGC GAGCAACTGC AGAAAATCAA GGACAGCGGT ACGCTCAATG TCGGCCTGGA AGGCACTTAC CCACCGTTCA GCTTTGTGGA TGAGAGCGGC AAGCTCACCG GCTTCGAAGT CGAGTTTTCC GAAGCGCTGG CCAAGGAACT GGGTGTCAAG GCCAAGATCC AGCCGTCGAA GTGGGATGGC ATCCTGGCCG CTCTGGACTC CAAGCGTCTG GACGTGGTGA TCAACCAGGT GACCATCTCC GACGAGCGCA AGAAGAAGTA CGACTTCTCC GAGCCCTACA CCATTTCCGG CATCCAGGCG CTGGTTCTGA AGAAGAACGC AGACACCATC AAGTCTGTCA AAGACCTGAG CGGCAAGAAG GTGGGCGTGG GTCTGGGCAC CAACTACGAG GAATGGCTCA AGGCGAACGT TCCGGACGCA ATCGTCAAAA CCTATGACGA TGACCCGAGC AAGATCCAGG ACCTGAGCGT AGGTCGTATC GATGCGATCC TCGTTGACCG TCTGGCCGCC CTGGAAATGG CTGCCAAGAC AAAAAACAAA CTCGTCCCGG CAGGCGAAGC ATTTTCCCGC CAGGCATCGG GTATTGCCCT GCGTAAAGGC GAGCCTGAAT TGCTGGCGGC CATCGACAAG GCCATCGACA AACTGCGTGC CGACGGCACG CTGAAGAAGC TGTCGGAAAA GTACTTCAAT GCTGATGTCA CCCAATGA
|
Protein sequence | MNISAIRRTF LFSAMGLMLS AGIAGQAMAG EQLQKIKDSG TLNVGLEGTY PPFSFVDESG KLTGFEVEFS EALAKELGVK AKIQPSKWDG ILAALDSKRL DVVINQVTIS DERKKKYDFS EPYTISGIQA LVLKKNADTI KSVKDLSGKK VGVGLGTNYE EWLKANVPDA IVKTYDDDPS KIQDLSVGRI DAILVDRLAA LEMAAKTKNK LVPAGEAFSR QASGIALRKG EPELLAAIDK AIDKLRADGT LKKLSEKYFN ADVTQ
|
| |