Gene Psyr_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0350 
Symbol 
ID3365826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp374091 
End bp375221 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID637650692 
ProductABC transporter 
Protein accessionYP_233460 
Protein GI66043619 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.782008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAA CCGCGCAACG CCAACGGCCA ATCGACACAA CGGGCGCAGG TCAACGGGCG 
CAACAGGCCG AGCTGCATCC GGAGCTGAAT CGCGCGCATG TGCGCTTCAT CAACCTGGGC
AAGACCTATC ACGGCAAGCA AGGCCCGGTG GAGGCGCTGG GCAATATCGA TCTGGCCGTC
CAGCACGGCG AGATCTTCGG CATCATCGGC CGCAGCGGCG CAGGCAAATC CTCGTTGATC
CGCACCATCA ATCGCCTGGA GCAACCGAGC AACGGTCGCG TATTGATCGA TCAGGTGGAC
ATCGGTGAGT TCGACGAAGA CAAGCTGGTG GAGCTGCGCC GACGCATCGG CATGATCTTC
CAGCACTTCA ACCTGATGTC GGCCAAGAAC GTCTGGCAGA ACGTCGAGCT GCCGCTCAAG
GTCGCCGGCG TGCCCAGGGA GCAACGCGCG CGCAAGGTCG CGCAGTTGCT GGAGCTGGTG
GGGTTGCAGG ACAAGCACAA GGCGTATCCC GCGCAACTGT CCGGCGGGCA GAAACAGCGT
GTCGGCATCG CTCGCGCGCT GGTGCACGAC CCGGCGATTC TGTTGTGCGA CGAAGCCACT
TCGGCACTGG ACCCGGAAAC CACCCAGTCG ATCCTCGGCC TGCTGCGCGA GATCAACCAG
CGCCTGGGCC TGACCATCGT GCTGATCACC CATGAAATGG CGGTTATCCG TGATATCTGT
CACCGCGTCG TGGTGCTGGA ACAGGGACGA ATCGTCGAGC AGGGGCCGGT ATGGCAGGTG
TTTGGCGACC CGCAGCACGA GGTCAGCAAA ACCCTGCTGG CGCCGCTGCA AACCGGACTG
CCGAAAGAGT GGGCCGAGCG CCTGAGCGAT CAGCCGCAAC GACCCGATGC GGCGCTGCTG
CTGGACGTGC ATTTCACCGG CGTCAGCGCT GAAGGGCCGG ATCTGGCGGC GCTGTTCACG
GCACTGGGCG GCAAGGTGGA GTTGCTGCAA GGCGGCGTCG AGCGCATTCA GGACCGGGCC
ATCGGGCATC TCATTCTGTC GGTTGCCGGC TCGCCACACA GTCGGGACGA GCTACTGGCG
CGCGCCCGCA CACTGGCGCC ACGCGCGGAG GTATTGGGTT ATGTGGGTTG A
 
Protein sequence
MTATAQRQRP IDTTGAGQRA QQAELHPELN RAHVRFINLG KTYHGKQGPV EALGNIDLAV 
QHGEIFGIIG RSGAGKSSLI RTINRLEQPS NGRVLIDQVD IGEFDEDKLV ELRRRIGMIF
QHFNLMSAKN VWQNVELPLK VAGVPREQRA RKVAQLLELV GLQDKHKAYP AQLSGGQKQR
VGIARALVHD PAILLCDEAT SALDPETTQS ILGLLREINQ RLGLTIVLIT HEMAVIRDIC
HRVVVLEQGR IVEQGPVWQV FGDPQHEVSK TLLAPLQTGL PKEWAERLSD QPQRPDAALL
LDVHFTGVSA EGPDLAALFT ALGGKVELLQ GGVERIQDRA IGHLILSVAG SPHSRDELLA
RARTLAPRAE VLGYVG