Gene Psyr_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0349 
Symbol 
ID3365825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp373457 
End bp374101 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID637650691 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_233459 
Protein GI66043618 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0321773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.735607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGTTG ATCGCTTGCT GCAAGGCACC CTCGACACCT TCCTGATGGT CGGTGTGTCG 
TCATTGATCG CACTGCTGCT GGGCATCCCG CTGGCGGTGA TTCTGGTGAC CAGTTCCAAA
GGCGGCATCT ACGCAGCACC GGGGATCAAC CGCGTGCTGG GCGGCTTCGT GAACCTGTTT
CGCTCGATTC CGTTCTTGAT CCTGATGGTC GCACTGATTC CGTTCACCCG GATGATTGTC
GGCACCACCT ATGGGGTCTG GGCAGCCGTC GTGCCGCTGA CCATTGCCGC CACGCCGTTC
TTTGCGCGGA TCGCCGAAGT GAGCCTGCGC GAGGTCGATC ATGGTTTGGT CGAGGCGGCG
CAGGCGATGG GCTGTCGGCG CTGGCACATC ATCTGGCATG TGCTGCTGCC GGAAGCGCGG
CCCGGCATCG TCGGCGGCTT TACCATCACG CTGGTGACGA TGATCAATTC ATCGGCCATG
GCCGGTGCCA TCGGCGCAGG CGGGTTGGGC GATATTGCCT ATCGCTATGG CTATCAGCGC
TTCGACACGC AGGTGATGCT GACCGTGATC GTCTTGCTGG TTGCGGTCGT CGCGCTGGTG
CAGCTGGGCG GCGACCGATT GGCACGCAGC TTCGACAGGC GCTGA
 
Protein sequence
MWVDRLLQGT LDTFLMVGVS SLIALLLGIP LAVILVTSSK GGIYAAPGIN RVLGGFVNLF 
RSIPFLILMV ALIPFTRMIV GTTYGVWAAV VPLTIAATPF FARIAEVSLR EVDHGLVEAA
QAMGCRRWHI IWHVLLPEAR PGIVGGFTIT LVTMINSSAM AGAIGAGGLG DIAYRYGYQR
FDTQVMLTVI VLLVAVVALV QLGGDRLARS FDRR