Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0349 |
Symbol | |
ID | 3365825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 373457 |
End bp | 374101 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637650691 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_233459 |
Protein GI | 66043618 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0321773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.735607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGTTG ATCGCTTGCT GCAAGGCACC CTCGACACCT TCCTGATGGT CGGTGTGTCG TCATTGATCG CACTGCTGCT GGGCATCCCG CTGGCGGTGA TTCTGGTGAC CAGTTCCAAA GGCGGCATCT ACGCAGCACC GGGGATCAAC CGCGTGCTGG GCGGCTTCGT GAACCTGTTT CGCTCGATTC CGTTCTTGAT CCTGATGGTC GCACTGATTC CGTTCACCCG GATGATTGTC GGCACCACCT ATGGGGTCTG GGCAGCCGTC GTGCCGCTGA CCATTGCCGC CACGCCGTTC TTTGCGCGGA TCGCCGAAGT GAGCCTGCGC GAGGTCGATC ATGGTTTGGT CGAGGCGGCG CAGGCGATGG GCTGTCGGCG CTGGCACATC ATCTGGCATG TGCTGCTGCC GGAAGCGCGG CCCGGCATCG TCGGCGGCTT TACCATCACG CTGGTGACGA TGATCAATTC ATCGGCCATG GCCGGTGCCA TCGGCGCAGG CGGGTTGGGC GATATTGCCT ATCGCTATGG CTATCAGCGC TTCGACACGC AGGTGATGCT GACCGTGATC GTCTTGCTGG TTGCGGTCGT CGCGCTGGTG CAGCTGGGCG GCGACCGATT GGCACGCAGC TTCGACAGGC GCTGA
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Protein sequence | MWVDRLLQGT LDTFLMVGVS SLIALLLGIP LAVILVTSSK GGIYAAPGIN RVLGGFVNLF RSIPFLILMV ALIPFTRMIV GTTYGVWAAV VPLTIAATPF FARIAEVSLR EVDHGLVEAA QAMGCRRWHI IWHVLLPEAR PGIVGGFTIT LVTMINSSAM AGAIGAGGLG DIAYRYGYQR FDTQVMLTVI VLLVAVVALV QLGGDRLARS FDRR
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