| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0345 |
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| Symbol | |
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| ID | 3365821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 367896 |
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| End bp | 368981 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637650687 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_233455 |
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| Protein GI | 66043614 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.336549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTC GGTCATGTCT GTTGCTGGGC AGCCTGCTGT TAAGCGGCGT TTTATTGAGT
GGCTGTGGCA AGGATGAAGC ACCTCCCGAG CCGGTGCGTC CCGTCGTGTT TGTCGAAGTC
CGGCCTGAGT CGAATCAGGA TTTCGGGCGT TTCGCCGGCA ATATCCAGGC GCGTTATCAA
AGTGTGCTGG GCTTTCGTGT CGCGGGGCGC ATTGCCCGGC GCGATGTTGA CGTAGGCGCT
GAAGTCAAGA AAGGCGACTT GCTGGCAACC CTCGATCCGA CCGATCAGCA GAACACGGTG
CGTGCCCGGC AGGGCGACCT GGCCAATGTT CAGGCGCAGT TGATCAACGC CCAGGCCAAT
GCTCGCCGCC AGCAGGAGCT GTTCGATCGC GGCGTCGGTG CCCAGGCGCA ACTGGACATC
GCCCTGACCG ACCTGAAGAC CGCCAGCTCG TCGCAGGAAC AGGCCAAGGC CGCGGCTCAA
CAGGCCCGCG ATCAATTGAG TTACAGCGAG CTGCGCAGTG ATCACGATGC GGTGGTTACC
GAGTGGAAAG TCGAAGCCGG ACAGGTGGTG ACAGCCGGTC AGGAAGTCGT GACCCTGGCG
CAGCCGGACA TCAAGGAAGC GGTGATCGAC CTGCCCGATA CATTGGCCGA CCAGTTACCG
TCCGACGTGG TATTCACCGT CGCCAGTCAG CTCAATCCGG AAGTGAACAC CACCGCCACC
ATTCGCGAAA TCGAGCCCCA GGCCGACCGC ACCACACGTA CGCGACGTGC GCGTCTGTCG
CTGGCGCAAA CGCCAGCGGC GTTCCGGCTG GGCACGGCCA TCAGCGTAAC GCTCAGCTCG
ACCATCACGC CGCGCATGCG TCTGCCGATC AATGCCCTGC AGGAAGTCGA TGGCAAACGC
CAGGTCTGGA TCGTCGACTC GCAGAGCCAG ACGGTGAACC CCAGAGCGGT GACTATTGCC
AGCCGTGACA GCGACTCCTT CGTGCTGACC GATGGCGTCA AAGCCGGTGA AAAAGTGGTG
AGCGCGGGCG TCAACAGCCT CAAGCCGGGC CAGAAAGTCA AAGTCGATGA GGAAAGCCCG
CGATGA
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| Protein sequence | MKRRSCLLLG SLLLSGVLLS GCGKDEAPPE PVRPVVFVEV RPESNQDFGR FAGNIQARYQ
SVLGFRVAGR IARRDVDVGA EVKKGDLLAT LDPTDQQNTV RARQGDLANV QAQLINAQAN
ARRQQELFDR GVGAQAQLDI ALTDLKTASS SQEQAKAAAQ QARDQLSYSE LRSDHDAVVT
EWKVEAGQVV TAGQEVVTLA QPDIKEAVID LPDTLADQLP SDVVFTVASQ LNPEVNTTAT
IREIEPQADR TTRTRRARLS LAQTPAAFRL GTAISVTLSS TITPRMRLPI NALQEVDGKR
QVWIVDSQSQ TVNPRAVTIA SRDSDSFVLT DGVKAGEKVV SAGVNSLKPG QKVKVDEESP
R
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