Gene Psyr_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0342 
Symbol 
ID3365818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp364205 
End bp365200 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content56% 
IMG OID637650684 
Producthypothetical protein 
Protein accessionYP_233452 
Protein GI66043611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.721447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGC AAACCACTCC ATGCCGCTAC CGCTACGACG CGCTGGACCG GCTCGCGACT 
CGCACGCCTG TGGGAGGGTC CATTGCCCGT TCGTTCTATC AGTCCGACAC GCTGGCCAGC
GAGATTCAGG ATGCAGAACA CCTTCGCTTC CTGCATCACG ATCGCCAGTT GCTCGCTACG
CAGTCAGCGC TCGCCACGTT GTTGATCGGC TCGGACCAAC AGCACAGCGT GCTCCACACC
GTATCGGCCG GCTTGCCTGC CGCTATCGCC TACACCCCCT ATGGGCATCG GCAAGCGCTG
AACCCGCTGC CAGGCTTCAA CGGTGAGCGA CCTGACCCGT TGACCGGTCA TTATCTGTTG
GGCAATGGTT ATCGCGCCTA CAACCCCGTT CTGATGCGCT TCAACAGCCC TGACAGCCTG
AGTCCGTTTG GCAACGGCGG AGTCAATGCG TATGGCTATT GTGCGGGTGA CCCGGTCAAT
CGATCCGATC CTACGGGACA TGGACTCATT GATGATGTGC AGACGTACAT CTACCTTGGC
ACAGCCCTTG TTACCGGCGT TTTTGGCCTT CTGACGGCTC GTTCGTCTAT AAAGGCTGTG
ATAAAGGGAG TGAAGCTGGA TCCCGAAGCA AACGCTGTCG ATAATGCCCT CTCCCAGACT
TCCGCGCTCA GAAGACCGGC GACCACGGTG GAAAAAGTCT CGGCAGCCAT TGGTGTCGGA
GCGCTGATTG CCAGTGCGAC ATGGACCGCC TCTTATATTG CAGGTAAGTT CGAGCGTGAT
TCACTGGCAG CTCGTACGCT GAGAAGCGTT GCTATAGTTG TTGTTGTCCC TGTCCTCGGG
TTTCGTGGCT GGACGTATTA TCGTTCCAGG CTTCCAGCGC GATCTGCAAA AAAAGCTTCG
ATGTCGAAGC GGAGCTCAAC TGGGTCTGAT CGCATTAGAT CCTCACGTTC AAGTATTCGA
AATGATGATC CAGAGATTGA AATCACTCCT CTTTGA
 
Protein sequence
MRQQTTPCRY RYDALDRLAT RTPVGGSIAR SFYQSDTLAS EIQDAEHLRF LHHDRQLLAT 
QSALATLLIG SDQQHSVLHT VSAGLPAAIA YTPYGHRQAL NPLPGFNGER PDPLTGHYLL
GNGYRAYNPV LMRFNSPDSL SPFGNGGVNA YGYCAGDPVN RSDPTGHGLI DDVQTYIYLG
TALVTGVFGL LTARSSIKAV IKGVKLDPEA NAVDNALSQT SALRRPATTV EKVSAAIGVG
ALIASATWTA SYIAGKFERD SLAARTLRSV AIVVVVPVLG FRGWTYYRSR LPARSAKKAS
MSKRSSTGSD RIRSSRSSIR NDDPEIEITP L