Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0330 |
Symbol | |
ID | 3365806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 349706 |
End bp | 350386 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637650672 |
Product | hypothetical protein |
Protein accession | YP_233440 |
Protein GI | 66043599 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.892923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.271742 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAGTAG TGGACAGTTC CGTTCTGAAA AAGTGGTACG ACAGCGAGTA CAGTGCGTGC AGTAGTGGTA CTTTGTTTGG CGAGTTAAGG GAGGAGTTAA AACGGTTTTT ATCAAACTTG CCTGATGGTC CTGGTGACGT GCTGGAGCTT GGCTGCGGAG ACGGTCGCAA CCTCGCGGCT TTGGCGATTA AAGGCTACAG CCTTAGCGGC GTGGACATGG TTGACAGCAC GGTACATAGC CGCCAGCTCA ATCCATGGCT AAAGGACATG AATTTTCAGC AAGCGAATAT CCTGAACTAC ACACCCGCAC CTGAAGGTTA CGACGTACTG GTGTGTTCTG AAGTGCTCCA CTTTTTCACT AAAGATGAGC TTCAACAGGT CATGCCGAAA ATAATCGGTG CAGTGAAACC CGGCGGGTAT ATCGTTCTGG ACTTGTTGTC CGACTTGACT CGTTTCTTTC AAGCCACGGG AGAGCCGTTT ATCTGGGATA AAGAAGCCGG GCTGTCCATC CAGGACAGCG AAGGCTTTTT TGATCGATGG CTTAGTGGCT TCGATATTGT TGATTTCAGT CACTTTTTTG ATAATCAAAG TTGGCCACTT ACCGACTCCG TCAGCCTGCC AATAGAGCCT TATACATGGC AAGGTACTTA TGTGTCGGTG TGTGCTAAAA AACGTAAGTA A
|
Protein sequence | MRVVDSSVLK KWYDSEYSAC SSGTLFGELR EELKRFLSNL PDGPGDVLEL GCGDGRNLAA LAIKGYSLSG VDMVDSTVHS RQLNPWLKDM NFQQANILNY TPAPEGYDVL VCSEVLHFFT KDELQQVMPK IIGAVKPGGY IVLDLLSDLT RFFQATGEPF IWDKEAGLSI QDSEGFFDRW LSGFDIVDFS HFFDNQSWPL TDSVSLPIEP YTWQGTYVSV CAKKRK
|
| |