Gene Psyr_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0330 
Symbol 
ID3365806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp349706 
End bp350386 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content48% 
IMG OID637650672 
Producthypothetical protein 
Protein accessionYP_233440 
Protein GI66043599 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.892923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.271742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTAG TGGACAGTTC CGTTCTGAAA AAGTGGTACG ACAGCGAGTA CAGTGCGTGC 
AGTAGTGGTA CTTTGTTTGG CGAGTTAAGG GAGGAGTTAA AACGGTTTTT ATCAAACTTG
CCTGATGGTC CTGGTGACGT GCTGGAGCTT GGCTGCGGAG ACGGTCGCAA CCTCGCGGCT
TTGGCGATTA AAGGCTACAG CCTTAGCGGC GTGGACATGG TTGACAGCAC GGTACATAGC
CGCCAGCTCA ATCCATGGCT AAAGGACATG AATTTTCAGC AAGCGAATAT CCTGAACTAC
ACACCCGCAC CTGAAGGTTA CGACGTACTG GTGTGTTCTG AAGTGCTCCA CTTTTTCACT
AAAGATGAGC TTCAACAGGT CATGCCGAAA ATAATCGGTG CAGTGAAACC CGGCGGGTAT
ATCGTTCTGG ACTTGTTGTC CGACTTGACT CGTTTCTTTC AAGCCACGGG AGAGCCGTTT
ATCTGGGATA AAGAAGCCGG GCTGTCCATC CAGGACAGCG AAGGCTTTTT TGATCGATGG
CTTAGTGGCT TCGATATTGT TGATTTCAGT CACTTTTTTG ATAATCAAAG TTGGCCACTT
ACCGACTCCG TCAGCCTGCC AATAGAGCCT TATACATGGC AAGGTACTTA TGTGTCGGTG
TGTGCTAAAA AACGTAAGTA A
 
Protein sequence
MRVVDSSVLK KWYDSEYSAC SSGTLFGELR EELKRFLSNL PDGPGDVLEL GCGDGRNLAA 
LAIKGYSLSG VDMVDSTVHS RQLNPWLKDM NFQQANILNY TPAPEGYDVL VCSEVLHFFT
KDELQQVMPK IIGAVKPGGY IVLDLLSDLT RFFQATGEPF IWDKEAGLSI QDSEGFFDRW
LSGFDIVDFS HFFDNQSWPL TDSVSLPIEP YTWQGTYVSV CAKKRK