Gene Psyr_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0329 
Symbol 
ID3365805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp347986 
End bp349239 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content60% 
IMG OID637650671 
Productsecretory lipase 
Protein accessionYP_233439 
Protein GI66043598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.282596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTCGT CGCCAGGATC CTCGACCGCT CTGGTCGCCT TGCTGATAGC TCTGCTCACA 
GGCTGTAGCG GAGCACCAGG CACTAGCGCG AAAACTGTCG GCGATACCCA GCCAGGCGAA
GGCGGTGTTC CCGCGTTTTA CGCATGGACA GATAAAGTGC CGTCAACGCC CGGACGGATG
CTGCGCGCCG AGCCACTGAC GCCCATTCAG AGCCTTGATA ATGCTGGCCA GAATGTCCGT
ATTTTGTATA CCTCCACCGA TGGGCTCAAC AACCAGCCAG TCGTAGTCTC CGGCGCACTG
TTTACTCCCA AGGGCACGCC GCCGAAGGGT GGATGGCCGT TGATGGCGTG GGCGCATGGC
ACGGTTGGTA GTGCGGATGT CTGCGCGCCT TCTTTTGCCG GGCGCAGTGG TCGCGACACG
CGCTATCTGA ATGAATGGCT CGGGCGCGGT TACGCGATTG TGGCCACTGA CTATGAGGGG
CTGGGGACGC CGGGGCTGCA TCCGTTCGGG CTGAGCAGCC CGCTGGCTTA CGGCGTTCTG
GACAGCATTC GTGCAGTTCA GAGGGCGGAT TTCAATCTGT CTTCGCGGGT TGTTGTGTTT
GGTCAGTCGC AGGGCGGTCG TGCGGCGTTT GCGACGGCTG TCTACAAGAA GACTTACGCA
CCGGAGCTGA ATATTGTCGG CGTGGTTGCG ACCGGGACGC CGTATCCGAT GGCTTCAGGG
CATGCCGGGC ATATCGGGCA AGGCACGTCA CGCGATCAGG TCACGCCATC CTTGGCTTAC
AACCTGCTGC GGCTGAGCAC TGCCGGGCTG ATCAACCCGT CGTTCGTGCC CACTGATTAT
CTGAGCGACC GTGCACAGCC TGCGTTTGGA GTCAGTCAGC GTGATTGCCT GCATGCCATT
GAGCGTGAGG TTGTTGCAGA TGGGCTGACG TTCAACAACA GTTTCAGCCG CTCGCCGGAG
GCTGCGCTTG ATCAGGTGAA CCGCGAGTCG TCCTACCCGA CGTTAACGTC GGACATCCCG
ATTTTTATAG GTACGGGCGG CAAGGATGTC GTTTCACCGG TCCGCAGCCA GATCGCGCTG
GTCAAGGATG CGTGCACCGC AGGCGACCGC ATTGAGTGGC ATTACTACCC GCAACTGGAT
CACTCCGGCG CAGTGAATGG CTCACTGCCG GACTCGACAC GTTTTGTCGA GAAAGCATTT
TCGGGGGAGC TTATGACGGG GAATTGTGGG GAGACGAAGA GCGTCGCACG ATAG
 
Protein sequence
MYSSPGSSTA LVALLIALLT GCSGAPGTSA KTVGDTQPGE GGVPAFYAWT DKVPSTPGRM 
LRAEPLTPIQ SLDNAGQNVR ILYTSTDGLN NQPVVVSGAL FTPKGTPPKG GWPLMAWAHG
TVGSADVCAP SFAGRSGRDT RYLNEWLGRG YAIVATDYEG LGTPGLHPFG LSSPLAYGVL
DSIRAVQRAD FNLSSRVVVF GQSQGGRAAF ATAVYKKTYA PELNIVGVVA TGTPYPMASG
HAGHIGQGTS RDQVTPSLAY NLLRLSTAGL INPSFVPTDY LSDRAQPAFG VSQRDCLHAI
EREVVADGLT FNNSFSRSPE AALDQVNRES SYPTLTSDIP IFIGTGGKDV VSPVRSQIAL
VKDACTAGDR IEWHYYPQLD HSGAVNGSLP DSTRFVEKAF SGELMTGNCG ETKSVAR