Gene Psyr_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0320 
Symbol 
ID3365796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp336861 
End bp337430 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID637650662 
Producthypothetical protein 
Protein accessionYP_233430 
Protein GI66043589 
COG category[S] Function unknown 
COG ID[COG3079] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.461583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATTC AGAATTCTCC GTACAAAGCG TTCGCCACTC TGCTCAATAG CGGTGGCCAT 
AAAGTATCCC CTGCCGAACT GCACGGCCTG CTGTTGGGCC GCAGTTGCGC GGGTGCCGGC
TTCGATAGCG AAGGCTGGTT CGCCGACGCC TCGATGCTGC TGGAAACCGA GCTGCTGGAA
ACCGAGCCGC AAGAAAACAT TCGTGCAGCG CTTGTCGGCC TGCAAGAGAT GGTCAAGGGC
GAACTCACCG GCGATGACAT GACGGTCGTG CTGTTGCTGC CGGGCGATGA TGAGCCGCTC
ACCGAGCGCG CCGCCGCGCT GGGCCAGTGG TGTCAGGGTT TCCTCGCAGG CTTTGGCCTG
TCCATCGGTG ACAAGGTTCT GGGCAGCGAA GCGAAAGCCG TGCTCGAGGA CCTGGCTGCC
ATCGCGCAGG TTCAGGACGC GCTGGAAGAG TCCGAAGACG GCGAAACCGA CTACATGGAA
GTCATGGAGT ACATGCGTGT AGCGCCGCTG CTGCTGTTCA CTGAATTCAA CGAGCCGTCC
GCGCCGCAAC CCAAGCCTTC CCTGCACTGA
 
Protein sequence
MPIQNSPYKA FATLLNSGGH KVSPAELHGL LLGRSCAGAG FDSEGWFADA SMLLETELLE 
TEPQENIRAA LVGLQEMVKG ELTGDDMTVV LLLPGDDEPL TERAAALGQW CQGFLAGFGL
SIGDKVLGSE AKAVLEDLAA IAQVQDALEE SEDGETDYME VMEYMRVAPL LLFTEFNEPS
APQPKPSLH