Gene Psyr_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0313 
Symbol 
ID3365789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp332888 
End bp333874 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content62% 
IMG OID637650655 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_233423 
Protein GI66043582 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.196168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TGTTATGCAA AGCCTTCGGT CCTGCCAGCA CACTGGTACT CGAAGACGTC 
CCCGGCCCTG CGATCAAAAA GAACGAAATT CTGCTCGACG TGCACGCCGC CGGGGTCAAC
TTTCCCGACA CCTTGATCAT CGAGGGTAAA TACCAGTTCA AACCACCCTT CCCGTTCTCA
CCGGGTGGCG AGGCCGCAGG CGTGATAGCC GCCGTCGGAG AAAACGTCAG CCACCTGAAA
CCCGGCGACC GCGTCATGGC GCTCACCGGC TGGGGCAGCT TTGCCGAGCA GGTCGCCGTG
CCCCACTACA ACGTGCTGCC GATTCCGCAG GGCATGGACT TCACCACGGC GGCCGCATTC
AGCATGACCT ACGGCACCTC CATGCACGCC CTCACACAAC GCGCCCGCCT GCAACCCGGC
GAAATCCTGC TGGTACTCGG TGCATCCGGC GGCGTCGGCC TTGCCGCCGT GGAAATCGGC
AAAGCCCTCG GCGCCCGCGT CATCGCCGCC GCCAGCAGCG CAGAAAAACT CGAAGTCGCC
AGAAACGCAG GCGCCGACGA ACTGATCAAC TACAGCGAAA CCAGCCTCAA GGACGAAATC
AAACGCCTCA CCCATGGCAA CGGCGCCGAC GTGATCTACG ACCCGGTCGG CGGCGACCTA
TTCGACCAGG CCATCCGCAG CATCGCCTGG AACGGCCGCC TGCTGGTCGT CGGCTTCGCC
AGCGGCCGCA TCCCCGAACT GCCCGTCAAT CTGACCCTGC TCAAGGGCGC TTCGGTGGTC
GGCGTGTTCT GGGGCTCGTT TGCCCAGCGA CAACCGCAGG ACAATGCGGC GAACTTCAAG
CAACTGTTTG CGTGGTTTGA AGAAGGGAAA TTGAAGCCGC TGGTGTCGAC GGTTTATCCG
CTGGAAAGGG CTGGGGAGGC GATTGATTTG TTGGGGGGAC GCAGGGCTGT GGGGAAGGTT
GTGGTTTTGA TTGGCAAGAC TGCCTGA
 
Protein sequence
MKALLCKAFG PASTLVLEDV PGPAIKKNEI LLDVHAAGVN FPDTLIIEGK YQFKPPFPFS 
PGGEAAGVIA AVGENVSHLK PGDRVMALTG WGSFAEQVAV PHYNVLPIPQ GMDFTTAAAF
SMTYGTSMHA LTQRARLQPG EILLVLGASG GVGLAAVEIG KALGARVIAA ASSAEKLEVA
RNAGADELIN YSETSLKDEI KRLTHGNGAD VIYDPVGGDL FDQAIRSIAW NGRLLVVGFA
SGRIPELPVN LTLLKGASVV GVFWGSFAQR QPQDNAANFK QLFAWFEEGK LKPLVSTVYP
LERAGEAIDL LGGRRAVGKV VVLIGKTA