Gene Psyr_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0302 
Symbol 
ID3365778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp321695 
End bp323173 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content61% 
IMG OID637650645 
Productcarboxylyase-like protein 
Protein accessionYP_233413 
Protein GI66043572 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGT TAATGAAATT CAAAGATCTT AGGGATTTCG TGCAGCAGCT TGAGCAGCGC 
GGAGAGTTGA AACGCATCCA GATGCCGATC TCGCCTGTGC TGGAAATGAC TGAAATCTGT
GACCGTACCT TGCGTGCCAA GGGCCCGGCG CTGTTATTCG AAAAACCGGT CGGTTTTGAT
ATCCCGGTGC TGGGCAACCT GTTCGGCACG CCAGAGCGCG TAGCCATGGG CATGGGCGCC
GAAGCGGTCA GTGAGCTGCG TGAAATCGGC AAGCTGCTGG CGTTCCTCAA AGAGCCCGAG
CCACCCAAGG GCCTGAAGGA TGCGTGGTCC AAGCTGCCGA TCTTCCGCAA GGTCATCGCC
ATGGCGCCAA AGGTCGTCAA GGATGCGCCC TGCCAGGAGG TCGTCATCGA AGGCGATGAC
GTCGACCTCG GCATGCTGCC TGTACAGACC TGCTGGCCGG GCGATGTCGC GCCGCTGATC
ACCTGGGGCC TGACGGTCAC CAAAGGCCCG AACAAGGAGC GCCAGAACCT CGGCATCTAT
CGCCAGCAGG TCATTGGCCG CAACAAGATC ATCATGCGCT GGCTCAGCCA TCGCGGCGGC
GCGCTGGACT TCCGCGACTG GTGCGTCAAG CATCCTGGCG AGCCTTATCC GGTGGCCGTC
GCGCTGGGCG CGGACCCGGC AACCATTCTC GGCGCCGTGA CGCCGGTACC GGACAGTCTG
TCCGAATATG CCTTTGCCGG GCTGCTGCGG GGCTCGCGCA CCGAACTGAT CAAGTGCCGT
GGCAGCAATC TGCAAGTTCC GGCCAGCGCC GAGATCGTCC TCGAAGGTGT GATTCACCCG
GGCGAGATGG CCGACGAGGG GCCTTACGGG GACCACACCG GCTATTACAA CGAAGTCGAC
AGCTTTCCGG TGCTGACCGT CGAGCGTATC ACCCACCGTA TCAAGCCGAT CTACCACAGC
ACCTACACCG GTCGTCCACC TGATGAGCCG GCGATTCTGG GCGTCGCGCT GAACGAAGTG
TTCGTGCCGA TTCTGCAAAA GCAGTTTCCG GAGATCGTCG ATTTCTACCT GCCGCCCGAG
GGTTGCTCGT ACCGCATGGC GGTGGTGACC ATCAAGAAAC AGTATCCCGG CCATGCCAAG
CGCGTGATGC TGGGTGTCTG GTCGTTCTTG CGCCAGTTCA TGTACACCAA ATTCGTGATC
GTCACCGACG ACGATATCAA TGCGCGGGAC TGGAACGACG TGATCTGGGC CATCACCACG
CGCATGGACC CCAAGCGCGA CACGGTCATG ATCGACAACA CGCCCATCGA TTACCTCGAT
TTCGCCTCGC CGGTGTCCGG CCTGGGATCG AAAATGGGGT TGGATGCCAC GAACAAATGG
CCAGGTGAGA CCAGCCGCGA GTGGGGCAGG GCGATCGTCA AGGACGAAGC CACCACACGC
CGGGTGGACG AAATCTGGAC TCAGTTGGGA ATAGACTGA
 
Protein sequence
MAGLMKFKDL RDFVQQLEQR GELKRIQMPI SPVLEMTEIC DRTLRAKGPA LLFEKPVGFD 
IPVLGNLFGT PERVAMGMGA EAVSELREIG KLLAFLKEPE PPKGLKDAWS KLPIFRKVIA
MAPKVVKDAP CQEVVIEGDD VDLGMLPVQT CWPGDVAPLI TWGLTVTKGP NKERQNLGIY
RQQVIGRNKI IMRWLSHRGG ALDFRDWCVK HPGEPYPVAV ALGADPATIL GAVTPVPDSL
SEYAFAGLLR GSRTELIKCR GSNLQVPASA EIVLEGVIHP GEMADEGPYG DHTGYYNEVD
SFPVLTVERI THRIKPIYHS TYTGRPPDEP AILGVALNEV FVPILQKQFP EIVDFYLPPE
GCSYRMAVVT IKKQYPGHAK RVMLGVWSFL RQFMYTKFVI VTDDDINARD WNDVIWAITT
RMDPKRDTVM IDNTPIDYLD FASPVSGLGS KMGLDATNKW PGETSREWGR AIVKDEATTR
RVDEIWTQLG ID