Gene Psyr_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0298 
Symbol 
ID3365774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp317876 
End bp318661 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID637650641 
Productextracellular solute-binding protein 
Protein accessionYP_233409 
Protein GI66043568 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC GTTACAGCGC CCTGCTTACT GCATTGTTTG CCAGTCTGAT GCTGAGCCAG 
ACACCCGCCC ACGCCAACGG CCTGGACGAC GTTGTAGCGC GCGGCACCCT CAAGGTAGCC
GTTCCGCAGG ACTTCCCGCC ATTCGGCTCG GTCGGCCCGG ACATGAAGCC GCGCGGCCTG
GACATCGATA CTGCACAGCT GCTGGCTGAC AAGCTGAAGG TCAAGCTGGA GCTGACCCCG
GTCAACAGCA CCAACCGCAT TCCGTTCCTG ACCACCGGCA AGGTCGACCT GGTGATCTCC
AGCCTGGGCA AGAACCCGGA TCGCGAGAAA GTCATCGACT TCTCGCGCGC CTACGCACCT
TTCTATCTGG CGGTATTCGG CCCACCTGAT TCGCCGGTCA AGGACATCGC TGACCTGAAA
GGCAAGACTA TCAGCGTGAC CCGTGGCGCG ATCGAGGATA TCGAGCTGTC GAACGTTGCT
CCCGAGGGCG CGACCATCAA GCGCTTTGAA GACAACAACT CGACCATCGC GGCCTATCTC
GCTGGCCAGA CTGACCTGAT CGCCAGCGGC AACGTGGTGA TGGTCGCCAT CAGTGAGCGC
AATCCCAAGC GCATTCCGGC GATGAAAGTG AAACTCAAGG ACTCGCCGGT GTACGTTGGC
GTGAACAAAG GTCAGCCAGA ACTGCTGGGC AAGGTCAACG AGATTCTGAA CGCTGCCAAG
GCTGACGGTA CGCTGGAAAA AGCGTCGCAG AAATGGCTGA AGGACCCGCT ACCCGCCGAT
CTCTGA
 
Protein sequence
MTKRYSALLT ALFASLMLSQ TPAHANGLDD VVARGTLKVA VPQDFPPFGS VGPDMKPRGL 
DIDTAQLLAD KLKVKLELTP VNSTNRIPFL TTGKVDLVIS SLGKNPDREK VIDFSRAYAP
FYLAVFGPPD SPVKDIADLK GKTISVTRGA IEDIELSNVA PEGATIKRFE DNNSTIAAYL
AGQTDLIASG NVVMVAISER NPKRIPAMKV KLKDSPVYVG VNKGQPELLG KVNEILNAAK
ADGTLEKASQ KWLKDPLPAD L