| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0284 |
|---|
| Symbol | |
|---|
| ID | 3365760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 302686 |
|---|
| End bp | 303318 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637650627 |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | YP_233395 |
|---|
| Protein GI | 66043554 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTA CTCAGAAAAG CGTTTTCATT GCTGCCGCCA TCGTCGCCCT GATTCTGGGT
GTGATTCTCA GTCAGGTGCT GCCCGGCCGC AGCTCACAGG ATCAGGCGGC GCTCAACGAC
GCCGGTATTG TCCTGCTCCC CAAAAGCCGC CAATTGCCGG CCCTGAGCAT GACCGACCAG
AACGGCGCGG CCGTGCCCCT TGATGGCTTG AAAGACCAAT GGACGCTGAT GTTCTTCGGC
TACACCTTCT GCCCGGACAT CTGCCCCACG ACCCTGGCGC AGATCAAGCA GATCAGGTCC
GAGCTGCCCG AAGAGACAGT CAAGCGCATG CGGGTAGTGC TGGTCAGCGT CGACCCGAAC
CGCGACACAC CGCAGCAGCT CAAGCAATAC CTGGGCTACT TCGACCCGCA GTACATCGGC
CTGACGGCAC CTGTCGCTGA TATCCAGACA CTGGCCAATG CCGTGAGCAT CCCGTTCATT
CCGGCCGATA CCGGTAAACC GAACTACTTC GTCGACCACA GCGGTAACCT GGCCCTGATC
GGCCCGGACG GCACGCAGCG CGGCTTTATC CGCGCACCGC TGAACAACAG GAAGCTGGTG
AAGCAATTGC CGGGGTTGCT GGGAAGGGAT TAG
|
|---|
| Protein sequence | MTRTQKSVFI AAAIVALILG VILSQVLPGR SSQDQAALND AGIVLLPKSR QLPALSMTDQ
NGAAVPLDGL KDQWTLMFFG YTFCPDICPT TLAQIKQIRS ELPEETVKRM RVVLVSVDPN
RDTPQQLKQY LGYFDPQYIG LTAPVADIQT LANAVSIPFI PADTGKPNYF VDHSGNLALI
GPDGTQRGFI RAPLNNRKLV KQLPGLLGRD
|
|---|
| |