Gene Psyr_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0279 
Symbol 
ID3365755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp296608 
End bp297324 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID637650622 
Productputative lipoprotein 
Protein accessionYP_233390 
Protein GI66043549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.925672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGT TCGCCCCACG CTATCTGCTG CTTGTCGCAT TTTCCATCTT GCTGGGTGCC 
TGCCAGAGTG CGCCCACTGT CGAGACGCCT GCCTCCGAGG CCCAGCCTGA TGCATTCGCT
CAGCTTGAGC AGAACATCGC CGGCAATGAG CTGGCAACCG CCGAGGACCA ATTGGCGGCG
TTGCAGGCTG CCAATCCTGC CGACATCCGT CTGGAGCCTT TTCAGCGTCG TCTGGCCGAA
GCCTATCTGA GCCGCAGTCA GATAAGCCTG CAGAAGGGCG ACATGAACGC GGCGGCCTCT
GCGCTGAGCC GTGCACGCGC CCTGATGCCC AAGGCACCGG CGCTGACCAG TGGCGTCAAC
GGCGCCATTG CCCATGCGCG CAAGGCCGAG CTGGAAAAAG CCGAAGCGGA TTTGAAAGCG
GCCGAAGCCA GAAGGGTTGC CAGACTGATT GACCCGTCGG CAGAAAGCAC GACGATTGAG
CTCAAGATCG GCGATATGCC TGCATTGCGT CGTCAACTCG ACGATATCGC AGCCGATACC
GTAGCGTTCA ACTGTGAAGT GCTGATGGTG GTGCCGCGTA CCGAAGACTA TCCGTGGCTG
GCTACGTTGC TGACCAAGCG GGTGGTCAAG GCCAATCCGG ATTTCGAACT GCAATTGCGT
CGACAGATCG AGCGCAATGA AAAAGCTCAC ATCATCCTCA CGCCAGCGAA GTCCTGA
 
Protein sequence
MKPFAPRYLL LVAFSILLGA CQSAPTVETP ASEAQPDAFA QLEQNIAGNE LATAEDQLAA 
LQAANPADIR LEPFQRRLAE AYLSRSQISL QKGDMNAAAS ALSRARALMP KAPALTSGVN
GAIAHARKAE LEKAEADLKA AEARRVARLI DPSAESTTIE LKIGDMPALR RQLDDIAADT
VAFNCEVLMV VPRTEDYPWL ATLLTKRVVK ANPDFELQLR RQIERNEKAH IILTPAKS