Gene Psyr_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0278 
Symbol 
ID3365754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp295781 
End bp296569 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID637650621 
Producthypothetical protein 
Protein accessionYP_233389 
Protein GI66043548 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT TTCTACTGTA TGCCTTGCTC GCAGGCGTTG CGCTGGCCGT GGTCGCTGGC 
CCGCTGGGAT CATTCGTGGT CTGGCGGCGC ATGGCGTATT TCGGCGACAC ACTTTCCCAC
GCCGCGCTGC TCGGCGTCGC GCTGGGCTTC CTGCTGGACA TCAGCCCGAC CATCGCGGTG
ACGGTCGGCT GCCTGCTGCT GGCGGTGTTG CTGGTCACGT TGCAACAGCG CCAACCGCTG
GCGTCGGACA CGCTGCTGGG GATTCTCGCG CCAAGCACTT TGTCGCTGGG GCTGGTGGTG
CTCAGTTTCA TGCACGAAGT GCGCATCGAC CTGATGGCCT ACCTGTTCGG CGATCTGCTG
GCCATCAGCC CGGCTGATCT GGGCTGGATT CTGGGCGGCA GCACGTTGGT GCTGGTGCTG
ATCGTCGCGC TGTGGCGCCC ACTGCTGGCA ATGACCGTGC ATGAAGAGCT GGCGCGGGTC
GAAGGCCTGC CGGTTGCTAC ACTGCGCATG ACCTTGATGC TGCTGATCGC CGTGGTGATC
GCGGTTGCGA TGAAAATCGT CGGTGTTCTG CTGATTACGT CGCTGTTGAT CATCCCGGCA
GCTGCGGCAC AGCGTCACGC CCGTTCGCCG GAGCAAATGG CGCTGGGCGC GAGCCTGTTG
GGCGTGATAG CCGTGTGTGC CGGGCTATCA TTGTCCTGGT TCAAGGACAC TCCTGCCGGA
CCGTCTATAG TGGTATCCGC TGCGGCGTTG TTCTTGCTCA GCTTTGTTCT ACCCAGGCGA
GCGGTGTAG
 
Protein sequence
MADFLLYALL AGVALAVVAG PLGSFVVWRR MAYFGDTLSH AALLGVALGF LLDISPTIAV 
TVGCLLLAVL LVTLQQRQPL ASDTLLGILA PSTLSLGLVV LSFMHEVRID LMAYLFGDLL
AISPADLGWI LGGSTLVLVL IVALWRPLLA MTVHEELARV EGLPVATLRM TLMLLIAVVI
AVAMKIVGVL LITSLLIIPA AAAQRHARSP EQMALGASLL GVIAVCAGLS LSWFKDTPAG
PSIVVSAAAL FLLSFVLPRR AV