Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0277 |
Symbol | |
ID | 3365753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 295000 |
End bp | 295788 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637650620 |
Product | ABC transporter |
Protein accession | YP_233388 |
Protein GI | 66043547 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGATG CATTGATACG TCTGGACAAG GTCGCCGTTA CGCTTTCCGG ACAAAACGTC TTGGATGACA TCCAGTTGAG CGTCAAACCC GGCGAGATCG TTACCCTGAT CGGCCCCAAC GGTGCCGGCA AGACCACGCT GGTGCGTGCG GTGCTGGGGC TGCTCAAGCC TGACTCCGGG ACCGTCTGGC GCAAGCCGAA GCTGCGTGTC GGCTACATGC CGCAAAAGCT GCATGTTGAC CAGACGCTGC CGCTGTCGGT GCTGCGTTTC CTGCGTCTGG TTCCCGGTGT GGATCGCACG GCCGCAGCGT CGGCGCTGGA AGAAGTCGGC GCCGGGAAAG TCATCGACAG CCCGATTCAG GGCATTTCCG GTGGCGAGAT GCAGCGTGTT CTGCTGGCGC GTGCGTTGTT GCGCAAGCCT GAGTTGCTGG TCCTCGACGA ACCGGTGCAG GGGGTCGATG TAGCGGGACA GGCCGAGCTG TACAGCCTGA TTACCCGGCT GCGCGACCGC CACCGGTGCG GCGTGCTGAT GGTTTCCCAC GATCTGCATC TGGTCATGAG CACCACCGAT CAGGTGGTGT GCCTGAACCG CCATGTCTGC TGTTCCGGGC ATCCCGAGCA GGTCAGCCAT GACCCGGCGT TCGTCGAACT GTTCGGCAAG AACGCACAGA GCCTGGCGAT CTATCACCAC CATCACGATC ACGCCCACGA TCTGCATGGC GCGGTGGTGA ATGACGCTGC ACCCCTCTCT CACACTCACG TTCACGGAGA CAGCTGTAAG CATGGCTGA
|
Protein sequence | MSDALIRLDK VAVTLSGQNV LDDIQLSVKP GEIVTLIGPN GAGKTTLVRA VLGLLKPDSG TVWRKPKLRV GYMPQKLHVD QTLPLSVLRF LRLVPGVDRT AAASALEEVG AGKVIDSPIQ GISGGEMQRV LLARALLRKP ELLVLDEPVQ GVDVAGQAEL YSLITRLRDR HRCGVLMVSH DLHLVMSTTD QVVCLNRHVC CSGHPEQVSH DPAFVELFGK NAQSLAIYHH HHDHAHDLHG AVVNDAAPLS HTHVHGDSCK HG
|
| |