Gene Psyr_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0275 
Symbol 
ID3365751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp293509 
End bp294450 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content63% 
IMG OID637650618 
Productperiplasmic solute binding protein 
Protein accessionYP_233386 
Protein GI66043545 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGTC TTTTAAATCT TGCTGCTGTT TTCTGGGTCA GCCTGCTGAT CATCTCCCCT 
GCTCAGGCCG AGGTCCGGGT GCTGACCAGC ATCAAGCCTC TGCAGCTGAT TGCGGCGGCT
GTACAGGATG GCGTCGGTAC ACCGGAAGTG CTTCTGCCGC CGGGTGCCTC ACCGCATAAC
TACGCGCTGC GCCCGTCCGA CGTACGGCGT GTACAGGAAG TCGAGTTGCT CTACTGGATC
GGCCCGGACA TGGAAACCTT CCTGCCGCGC GTCATTCAGG GCCGCAAACT GCCTGCGGTT
GCCGTACAGA CACTGCCGGG CATGCACTTG CGGCACTTTG GCGAAGACAA CGCCTCGCAT
GATGACCACG AGCATGATCA CGACAACGAC GCAGACGAAC ATGACCACGA CCACCGCCCC
GGCAGTCTCG ATTCGCACCT GTGGCTGTCG ACCGTCAACG CGCGGGTGAT CGCCGCAAAA
ATGGCCACTG ACCTGAGCGC TGCCGACCCC GCCAACGCAG CCCGCTACGC CAGCAACGCC
GAGGCGTTCA GCAAACGTCT GGATACGCTG GACGCCCGTA TCAAGCAGCG TGTCAGCACA
GTGGCAGGCA AGCCTTACTT CGTATTCCAC GAAGCCTTCG ATTATTTCGA AGAGGCCTAT
GGGCTCAAGC ATGCCGGGGT ATTCGCCATC GCCGCCGAGA TCCAGCCCGG CGCCCAGCAC
GTCGCCGCCA TGCGCGAACG CCTGAAAGCT GCAGGCAAGA CCTGCGTATT CAGCGAACCG
CCCCTGCGCC CGCGCCTGGC CGAAACCCTG AGCGCCGGCC TGCCGGTCAA ACTGGCCGAA
CTGGATGCAC TGGGCGGCTA CACCCCGGCC ACCGCGCAGG GTTACGAGCA AGTCCTGCAA
AAGCTCGCCG ACGACCTGGC AGGTTGCCTG AGTAGTCTCT GA
 
Protein sequence
MRRLLNLAAV FWVSLLIISP AQAEVRVLTS IKPLQLIAAA VQDGVGTPEV LLPPGASPHN 
YALRPSDVRR VQEVELLYWI GPDMETFLPR VIQGRKLPAV AVQTLPGMHL RHFGEDNASH
DDHEHDHDND ADEHDHDHRP GSLDSHLWLS TVNARVIAAK MATDLSAADP ANAARYASNA
EAFSKRLDTL DARIKQRVST VAGKPYFVFH EAFDYFEEAY GLKHAGVFAI AAEIQPGAQH
VAAMRERLKA AGKTCVFSEP PLRPRLAETL SAGLPVKLAE LDALGGYTPA TAQGYEQVLQ
KLADDLAGCL SSL