Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0265 |
Symbol | |
ID | 3365741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 282046 |
End bp | 282897 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637650608 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_233376 |
Protein GI | 66043535 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGGTG CCCCATGCTA TTTGTATACA TTTTGTTATG ATGTTTCATT TCCTGCCGAC GCTGCCGACC TCATGAAGCT GTATTTATCC GCCTTTCTCA TGCTCCTCCT CACTGCCTGT GCCAGCGGCC CAAGGCTGGA CACCAGCCAT CCTTCGGTAA ATTTCGATGG CCGTGCTCAG TACGTGGTGA TGCATTACAC CTCGACGTCG CTGGAACACT CGCTGCAATT ACTGACGCAT GGCGAGGTCA GCGCCCACTA CCTGATCGGT GACGACAGCA AAGCCACCAT CTACAAGCTG GTCGATGAAA ACGCGCGTGC CTGGCATGCC GGCGAAAGCG AGTGGGAAGG CCGCACCTGG CTCAACTCCA GCTCGATCGG CATCGAGATC GTCAATCCGG GTTTCAAGGA AACGCCGACA GGGCGCCTGT GGTATCCGTA TACCGAAGCG CAGACCCAGT CGATCATTGT CCTGCTCAAG GACATCGTCA AACGCAACAG GATCGACCCC AAACACATCA TCGGTCATAG CGACATCGCC CCATTGCGCA AGCAGGACCC GGGGCCATTG TTCCCGTGGA AACGCCTCGC TGCCGAAGGT CTGGGGAACT GGCCGGATGA ACGCCAGGTT GCCCAGCGTC AGGCACTGCT GGCAACTAAC CTGCCGAGCA TCACCTGGTT CCAGCAGCAG TTGGCGCGCC TGGGCTACAG CACCCCGCAG ACCGGTGAGC TGGATGTCGC GACACGTCAG GTACTGGCCG CCTTCCAGAT GCACTATCGC CCGGCACGCT TCGACGGCGA GCCGGACGCA CAGAGCGCGG CCATCCTGCA GGTGCTCAAT CACTCGAATT GA
|
Protein sequence | MAGAPCYLYT FCYDVSFPAD AADLMKLYLS AFLMLLLTAC ASGPRLDTSH PSVNFDGRAQ YVVMHYTSTS LEHSLQLLTH GEVSAHYLIG DDSKATIYKL VDENARAWHA GESEWEGRTW LNSSSIGIEI VNPGFKETPT GRLWYPYTEA QTQSIIVLLK DIVKRNRIDP KHIIGHSDIA PLRKQDPGPL FPWKRLAAEG LGNWPDERQV AQRQALLATN LPSITWFQQQ LARLGYSTPQ TGELDVATRQ VLAAFQMHYR PARFDGEPDA QSAAILQVLN HSN
|
| |