Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0253 |
Symbol | |
ID | 3365729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 266353 |
End bp | 267540 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637650596 |
Product | acetylornithine deacetylase |
Protein accession | YP_233364 |
Protein GI | 66043523 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGGCC GTGTTCCGTC TCGATTACAG GAAGCGTCCA TGCCGTTGCC GTCCATGAAA GACCAGTTCG CCGCGCTGAT CGCCGTACCC TCGGTGAGCT GCACTCAGCC TTCCCTGGAC CAGAGCAACC GCCCCGTCAT CGATCTGCTG GCCGGATGGC TCGGCGATCT GGGGTTTGCC TGCGACATCC AGCAAGTTTC CCCCGGCAAG TTCAATCTGC TGGCGACCTA CGGTACAGGC CCGGGCGGCC TGGTACTGGC GGGGCACAGC GATACCGTGC CGTTCGACGA GGCACTGTGG AAAACCGACC CCTTGAAGCT GACCGAGGTG GATGGCCGCT GGGTCGGGCT GGGCAGTTGT GACATGAAGG GCTTCTTTGC GCTGGTCATC GAAGCGGTGC GTGGCCTTCT TGACCAGCCG TTCAAGCAGC CGCTGCTGAT CCTCGCCACC TGCGACGAGG AAAGCTCGAT GGCCGGTGCC CGCGCGCTGG CCGACGCCGG ACGCCCGCTG GGTCGTGCGG CAGTGATTGG CGAGCCGACC GGGCTCAAGC CGATCCGCCT GCATAAGGGC GTGATGATGG AGCGCATCGA TATTCTCGGG CGCAGCGGTC ATTCCTCCGA CCCGAGCCTC GGGCACAGCG CACTCGAAGC CATGCACGAC GCCATCAGCG AACTCAAGGG CCTGCGCACG CAGTGGCAGG CGAAGTACCG CAACCCGCAA TTCACGGTGC CGCAGCCGAC GCTGAACCTG GGCTGTATTC ATGGCGGCGA CAACCCGAAC CGGATTTGTG GCCAGTGCTC GCTGGAGTTC GACCTGCGTC CGCTGCCGGG CATGGACCCG GAGATGCTGC GCTCGGCGAT TCGGCAGAAG CTGCAGCCGC TGGCCGAGCT GCACCAGGTA CAGATCGACT ACGCACCGCT GTTCCCCGAA TGTGCGCCGT TCGAGCAGAT CGCTGACGCT GAACTTGTGC GTGTCGCTGA ACGTCTGACC GGTCATACCG CTGCCGCAGT AGCATTCGGC ACCGAAGCGC CTTATCTTCA GCGCCTCGGC TGCGAGACAC TGGTGCTCGG CCCGGGCGAC ATCGCCTGTG CGCATCAGCC GGGGGAATAC CTCGAAATGT CACGTCTTGA CCCTACAGTG CGTCTGTTAC GTCAACTGAT CGAACATTAC TGCCTGACGC CCCAGTGA
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Protein sequence | MMGRVPSRLQ EASMPLPSMK DQFAALIAVP SVSCTQPSLD QSNRPVIDLL AGWLGDLGFA CDIQQVSPGK FNLLATYGTG PGGLVLAGHS DTVPFDEALW KTDPLKLTEV DGRWVGLGSC DMKGFFALVI EAVRGLLDQP FKQPLLILAT CDEESSMAGA RALADAGRPL GRAAVIGEPT GLKPIRLHKG VMMERIDILG RSGHSSDPSL GHSALEAMHD AISELKGLRT QWQAKYRNPQ FTVPQPTLNL GCIHGGDNPN RICGQCSLEF DLRPLPGMDP EMLRSAIRQK LQPLAELHQV QIDYAPLFPE CAPFEQIADA ELVRVAERLT GHTAAAVAFG TEAPYLQRLG CETLVLGPGD IACAHQPGEY LEMSRLDPTV RLLRQLIEHY CLTPQ
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