Gene Psyr_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0253 
Symbol 
ID3365729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp266353 
End bp267540 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content64% 
IMG OID637650596 
Productacetylornithine deacetylase 
Protein accessionYP_233364 
Protein GI66043523 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01892] acetylornithine deacetylase (ArgE) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGCC GTGTTCCGTC TCGATTACAG GAAGCGTCCA TGCCGTTGCC GTCCATGAAA 
GACCAGTTCG CCGCGCTGAT CGCCGTACCC TCGGTGAGCT GCACTCAGCC TTCCCTGGAC
CAGAGCAACC GCCCCGTCAT CGATCTGCTG GCCGGATGGC TCGGCGATCT GGGGTTTGCC
TGCGACATCC AGCAAGTTTC CCCCGGCAAG TTCAATCTGC TGGCGACCTA CGGTACAGGC
CCGGGCGGCC TGGTACTGGC GGGGCACAGC GATACCGTGC CGTTCGACGA GGCACTGTGG
AAAACCGACC CCTTGAAGCT GACCGAGGTG GATGGCCGCT GGGTCGGGCT GGGCAGTTGT
GACATGAAGG GCTTCTTTGC GCTGGTCATC GAAGCGGTGC GTGGCCTTCT TGACCAGCCG
TTCAAGCAGC CGCTGCTGAT CCTCGCCACC TGCGACGAGG AAAGCTCGAT GGCCGGTGCC
CGCGCGCTGG CCGACGCCGG ACGCCCGCTG GGTCGTGCGG CAGTGATTGG CGAGCCGACC
GGGCTCAAGC CGATCCGCCT GCATAAGGGC GTGATGATGG AGCGCATCGA TATTCTCGGG
CGCAGCGGTC ATTCCTCCGA CCCGAGCCTC GGGCACAGCG CACTCGAAGC CATGCACGAC
GCCATCAGCG AACTCAAGGG CCTGCGCACG CAGTGGCAGG CGAAGTACCG CAACCCGCAA
TTCACGGTGC CGCAGCCGAC GCTGAACCTG GGCTGTATTC ATGGCGGCGA CAACCCGAAC
CGGATTTGTG GCCAGTGCTC GCTGGAGTTC GACCTGCGTC CGCTGCCGGG CATGGACCCG
GAGATGCTGC GCTCGGCGAT TCGGCAGAAG CTGCAGCCGC TGGCCGAGCT GCACCAGGTA
CAGATCGACT ACGCACCGCT GTTCCCCGAA TGTGCGCCGT TCGAGCAGAT CGCTGACGCT
GAACTTGTGC GTGTCGCTGA ACGTCTGACC GGTCATACCG CTGCCGCAGT AGCATTCGGC
ACCGAAGCGC CTTATCTTCA GCGCCTCGGC TGCGAGACAC TGGTGCTCGG CCCGGGCGAC
ATCGCCTGTG CGCATCAGCC GGGGGAATAC CTCGAAATGT CACGTCTTGA CCCTACAGTG
CGTCTGTTAC GTCAACTGAT CGAACATTAC TGCCTGACGC CCCAGTGA
 
Protein sequence
MMGRVPSRLQ EASMPLPSMK DQFAALIAVP SVSCTQPSLD QSNRPVIDLL AGWLGDLGFA 
CDIQQVSPGK FNLLATYGTG PGGLVLAGHS DTVPFDEALW KTDPLKLTEV DGRWVGLGSC
DMKGFFALVI EAVRGLLDQP FKQPLLILAT CDEESSMAGA RALADAGRPL GRAAVIGEPT
GLKPIRLHKG VMMERIDILG RSGHSSDPSL GHSALEAMHD AISELKGLRT QWQAKYRNPQ
FTVPQPTLNL GCIHGGDNPN RICGQCSLEF DLRPLPGMDP EMLRSAIRQK LQPLAELHQV
QIDYAPLFPE CAPFEQIADA ELVRVAERLT GHTAAAVAFG TEAPYLQRLG CETLVLGPGD
IACAHQPGEY LEMSRLDPTV RLLRQLIEHY CLTPQ