| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0249 |
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| Symbol | |
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| ID | 3365725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 261709 |
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| End bp | 263493 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637650592 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_233360 |
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| Protein GI | 66043519 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCC TGGCCCCCTC TTCACAGGAT CGCTGGCTCG ATCTGAATGA TGTGTTGCGT
GATCTGGTTG CCGAAGGCTA TCTCGGCCAG GACGACGCGG AAACGGCACT CACCCAACGT
CGCAGTGCGG TGAACATTCA GCTGCACCCC CTCGAGTTTC TCGCTTCGCT GCAGTTTGAC
GATTTCAAGC GGCCGGGCAA GAAGCTGGAC GTGGAAACCC TGACCGCCTG GCTGGCCAAA
GCCTGTGGCC AGCCTTACAT GCGTATCGAC CCGCTGAAGA TCAACGTCGC GGCGGTCACG
CCACTGATGT CCTACGCCTT TGCCCAGCGC CACAAGATTC TGGCCGTGGC GGTCGATCGC
GAATCGGTGA CCATCGCCAG CGCGCAGCCG TATGTGCGCT CATGGGAAGC CGACCTGGCG
CATGTGCTCA AACTGCAGAT CAAACGTGTG GTCGCCAACC CGGCAGACAT CCAGCGCATG
GCGATGGAGT TTTTCAGGCT GGCCAAGTCG GTCAGCGGCG CCAGCGCCTC CGAGCAAAAA
ATGAGCAACA TGGGCAACTT CGAACAGTTG CTCAAGCTCG GTGCCAGCGA TCAGGAGCCT
GACGCCAACG ACGCGCACAT CGTCAATATC GTCGACTGGC TGTTCCAGTA CGCCTTCCAG
CAACGCGCCA GTGATATTCA CATCGAGCCG CGCCGCGAAC AGGGCACCGT GCGCTTTCGC
ATCGACGGGG TGCTGCACAA CGTTTACCAG TTTCCGGCGC AGGTGATCAT GGCGATTGTC
AGCCGACTGA AAAGCCTGGG CCGGATGAAC GTCGCCGAAA AACGCAAACC ACAGGACGGG
CGGGTCAAGA CCACCACGCC TGAGAATCGC GAAGTGGAGT TGCGCCTGTC GACCCTGCCG
ACCGCGTTCG GCGAAAAAAT GGTCATGCGG ATCTTCGACC CCGAGGTATT GCTCAAGGAC
TTCGACCAAC TGGGCTTTTC CAGTGACGAC CTGCGGCGCT GGCAGGAAAT GACCCGCCAG
CCCAACGGCA TTATTCTGGT TACCGGTCCG ACCGGTTCAG GCAAGACCAC CACGCTGTAC
ACCACCCTCA AGAAGCTGGC GACCTCCGAG GTCAACCTGT GCACCATCGA AGATCCCATC
GAGATGGTCG AACCGGCCTT CAACCAGATG CAGGTTCAAC ACAACATCGA CCTGAGCTTT
GCCGCCGGCG TGCGCGCACT GATGCGACAG GACCCGGATA TCATCATGAT CGGCGAGATT
CGCGACCTGG AGACCGCTGA AATGGCGATT CAGGCGGCAC TCACCGGCCA CCTGGTGCTG
TCGACGCTGC ACACCAACGA TGCGCCCAGC GCAATCAGCC GCATGCTCGA ACTGGGTGTA
CCGCATTACC TGCTCAAGGC CACCATCCTC GGCGTCATGG CCCAGCGTCT GGTGCGCACC
CTGTGCCCAC ACTGCAAGGC GCCCATCAAC CTCAACGAGA CCGACTGGCA AACCCTGACG
CGCCCCTGGC AGGCACCGGT GCCGCCTGGC GCGCATCAGG CGGTCGGCTG CGTGGAGTGT
CGCGATACCG GCTACCGTGG CCGGGCGGGT GTTTACGAGA TCATGGTCAT GTCCGACAAC
ATCAAGGCAT TGATCTCGGC GGACCTGGAC CTGACTGCCA TGCGTCGTCA GGCCTTCAAG
GAAGGAACGC GCAGCCTGCG TCTGTCCGGC GCGCAGAAAG TCTCGGCAGG CCTGACTACA
CTCGAGGAAG TGCTGCGAGT GACACCGCAG AGCGAACAAC GCTGA
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| Protein sequence | MAALAPSSQD RWLDLNDVLR DLVAEGYLGQ DDAETALTQR RSAVNIQLHP LEFLASLQFD
DFKRPGKKLD VETLTAWLAK ACGQPYMRID PLKINVAAVT PLMSYAFAQR HKILAVAVDR
ESVTIASAQP YVRSWEADLA HVLKLQIKRV VANPADIQRM AMEFFRLAKS VSGASASEQK
MSNMGNFEQL LKLGASDQEP DANDAHIVNI VDWLFQYAFQ QRASDIHIEP RREQGTVRFR
IDGVLHNVYQ FPAQVIMAIV SRLKSLGRMN VAEKRKPQDG RVKTTTPENR EVELRLSTLP
TAFGEKMVMR IFDPEVLLKD FDQLGFSSDD LRRWQEMTRQ PNGIILVTGP TGSGKTTTLY
TTLKKLATSE VNLCTIEDPI EMVEPAFNQM QVQHNIDLSF AAGVRALMRQ DPDIIMIGEI
RDLETAEMAI QAALTGHLVL STLHTNDAPS AISRMLELGV PHYLLKATIL GVMAQRLVRT
LCPHCKAPIN LNETDWQTLT RPWQAPVPPG AHQAVGCVEC RDTGYRGRAG VYEIMVMSDN
IKALISADLD LTAMRRQAFK EGTRSLRLSG AQKVSAGLTT LEEVLRVTPQ SEQR
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