Gene Psyr_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0242 
Symbol 
ID3365718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp255189 
End bp255713 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID637650585 
Producthypothetical protein 
Protein accessionYP_233353 
Protein GI66043512 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC TTGTCGATCA TCTCAGCCAA TACGCGGCTT ATCACCGTGA TTCACGCAAT 
ATCGTGACGC ACTTCGTGGG TATTCCACTG ATCGTGCTGG CCGTGGCGGT GCTTCTCTCG
CGACCGGGCT GGACTGTCAG CGGGCTGTGG CTTTCACCTG CGGCGCTGCT GGCGCTGGGC
TCGACGGTGT TTTACCTGCG ACTCGATCGC GCCCTGGGCA TGGTCATGGC GGTGTTACTG
GCGCTGTGTA TCTGGGCCGG GGCCAACCTT GCGCAGCAGG CAACCATGGT CTGGCTGAGT
GCGGGCGTCG GGCTCTTTGT GATTGGCTGG ATCATCCAGT TCGTCGGCCA TTACTACGAG
GGGCGCAAAC CGGCCTTCAT CGATGACCTG ACCGGGCTGA TCATCGGCCC GTTGTTTGTG
GTCGCGGAGC TGGCGTTCCT GATGGGCCAG CGCAAAGCTC TGCAGCACGC CATCGAAGAG
CGCGCGGGCC CGGTGGGGCG TGCGACCCGC AAGGCAACGA CCTAG
 
Protein sequence
MKTLVDHLSQ YAAYHRDSRN IVTHFVGIPL IVLAVAVLLS RPGWTVSGLW LSPAALLALG 
STVFYLRLDR ALGMVMAVLL ALCIWAGANL AQQATMVWLS AGVGLFVIGW IIQFVGHYYE
GRKPAFIDDL TGLIIGPLFV VAELAFLMGQ RKALQHAIEE RAGPVGRATR KATT