Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0238 |
Symbol | |
ID | 3365714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 251961 |
End bp | 252560 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637650581 |
Product | helix-hairpin-helix DNA-binding motif-containing protein |
Protein accession | YP_233349 |
Protein GI | 66043508 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG0662] Mannose-6-phosphate isomerase [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCGT TCACATCGAC TAGACCTGAC AAAACCTGGG GGAATATCGC ATTGGACGTG GGTGAACGAC TGCAATCGAT TCGCAAGCTC AAAGGCTTGT CCCAGCGTGA ACTCGCCAAG CGCGCAGGTG TGACCAACAG CACCATCTCC ATGATCGAAA AAAACAGCGT CAGCCCTTCG ATCAGTTCGC TGCGCAAGGT GCTCGGCGGC ATCCCCATGT CCATGGTCGA ATTTTTCTCG GAAGAGTCCG TGCCCGAAAA CGCGGCTCAA GTGGTCTACA AGGCCAGCGA GCTGATTGAT ATATCGGACG GTGCCGTGAC CATGAAGCTG GTCGGCAAAT CGCATCAGGG CCGTGCCATC GCCTTTCTCA CCGAAACCTA TCCACCGGGT GCCGATACCG GCGAAGAGAT GCTCGTCCAC GAAGGCGAAG AGACCGGCAT CCTCGTCGAG GGGCGGCTGG AACTGGTGGT CGGGCTGGAT ACCTACGTGC TCGAAGCGGG TGACAGCTAT TATTTCGAAA GCACCCGGCC GCATCGCTTT CGTAACCCGT TCGACGTCCC GGCACGATTG ATCAGTGCGG CCACCCCGGC CAATTTCTGA
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Protein sequence | MMAFTSTRPD KTWGNIALDV GERLQSIRKL KGLSQRELAK RAGVTNSTIS MIEKNSVSPS ISSLRKVLGG IPMSMVEFFS EESVPENAAQ VVYKASELID ISDGAVTMKL VGKSHQGRAI AFLTETYPPG ADTGEEMLVH EGEETGILVE GRLELVVGLD TYVLEAGDSY YFESTRPHRF RNPFDVPARL ISAATPANF
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