Gene Psyr_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0238 
Symbol 
ID3365714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp251961 
End bp252560 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content58% 
IMG OID637650581 
Producthelix-hairpin-helix DNA-binding motif-containing protein 
Protein accessionYP_233349 
Protein GI66043508 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGT TCACATCGAC TAGACCTGAC AAAACCTGGG GGAATATCGC ATTGGACGTG 
GGTGAACGAC TGCAATCGAT TCGCAAGCTC AAAGGCTTGT CCCAGCGTGA ACTCGCCAAG
CGCGCAGGTG TGACCAACAG CACCATCTCC ATGATCGAAA AAAACAGCGT CAGCCCTTCG
ATCAGTTCGC TGCGCAAGGT GCTCGGCGGC ATCCCCATGT CCATGGTCGA ATTTTTCTCG
GAAGAGTCCG TGCCCGAAAA CGCGGCTCAA GTGGTCTACA AGGCCAGCGA GCTGATTGAT
ATATCGGACG GTGCCGTGAC CATGAAGCTG GTCGGCAAAT CGCATCAGGG CCGTGCCATC
GCCTTTCTCA CCGAAACCTA TCCACCGGGT GCCGATACCG GCGAAGAGAT GCTCGTCCAC
GAAGGCGAAG AGACCGGCAT CCTCGTCGAG GGGCGGCTGG AACTGGTGGT CGGGCTGGAT
ACCTACGTGC TCGAAGCGGG TGACAGCTAT TATTTCGAAA GCACCCGGCC GCATCGCTTT
CGTAACCCGT TCGACGTCCC GGCACGATTG ATCAGTGCGG CCACCCCGGC CAATTTCTGA
 
Protein sequence
MMAFTSTRPD KTWGNIALDV GERLQSIRKL KGLSQRELAK RAGVTNSTIS MIEKNSVSPS 
ISSLRKVLGG IPMSMVEFFS EESVPENAAQ VVYKASELID ISDGAVTMKL VGKSHQGRAI
AFLTETYPPG ADTGEEMLVH EGEETGILVE GRLELVVGLD TYVLEAGDSY YFESTRPHRF
RNPFDVPARL ISAATPANF