Gene Psyr_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0236 
Symbol 
ID3365712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp250385 
End bp250738 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content61% 
IMG OID637650579 
Productendoribonuclease L-PSP 
Protein accessionYP_233347 
Protein GI66043506 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC AGCGCCAGCT CACCAATGAG CGCATGAGTC AGGTCGTTGT CCACAATGGC 
ACCGTCTATC TGTCGGGCCA GGTCGGCAAT GACATGACCG CCGGTGTCGA GCAGCAGACC
CGAGAGGTTC TGAACAGCAT CGAGCGCCTG CTCGACCTGG CCGGCACCGA CAAGACGCGT
ATCCTGTCGG TCACCATTTA CCTGAAAGAC ATCGACGCCG ACTTCGCCGG CATGAACAGC
GTCTGGGACA AATGGCTGCC CAAGGGTTTC GCGCCTGCAC GCGCAACGGT CGAGGCCAAG
CTGTGCGAGC CGGAAATCCT CGTTGAACTG TCGGTGGTTG CCGCGCTGCC CTGA
 
Protein sequence
MSIQRQLTNE RMSQVVVHNG TVYLSGQVGN DMTAGVEQQT REVLNSIERL LDLAGTDKTR 
ILSVTIYLKD IDADFAGMNS VWDKWLPKGF APARATVEAK LCEPEILVEL SVVAALP