| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0208 |
|---|
| Symbol | |
|---|
| ID | 3365684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 222599 |
|---|
| End bp | 222979 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637650551 |
|---|
| Product | YjgF-like protein |
|---|
| Protein accession | YP_233319 |
|---|
| Protein GI | 66043478 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA CTGTCATCAC CAGCGATAAA GCCCCTGCGG CCATTGGCCC TTACTCACAG
GCCATCAAAG CTGGCAATAC CGTCTACATG TCCGGACAGA TCCCGTTGGA CCCGAGCACC
ATGGAACTGG TCGAGGGCAT CGAAGCCCAG ATCACTCAGG TCTTCGAAAA CCTCAAGTCG
GTTGCCGAAG CAGCGGGCGG ATCGTTCAAG GACATCGTCA AACTGAACAT CTTTCTGACC
GATCTGGGCC ACTTCGCCAA GGTCAACGAG CTGATGAGCA CCTACTTCAC TCAGCCTTAT
CCGGCTCGTG CAGCCATCGG CGTTGCGGCC CTGCCGCGTG GCGCCCAGGT TGAAATGGAC
GCGATTCTCG TCATCGAATA A
|
|---|
| Protein sequence | MTKTVITSDK APAAIGPYSQ AIKAGNTVYM SGQIPLDPST MELVEGIEAQ ITQVFENLKS
VAEAAGGSFK DIVKLNIFLT DLGHFAKVNE LMSTYFTQPY PARAAIGVAA LPRGAQVEMD
AILVIE
|
|---|
| |