Gene Psyr_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0206 
Symbol 
ID3365682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp220906 
End bp221754 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content63% 
IMG OID637650549 
Producthypothetical protein 
Protein accessionYP_233317 
Protein GI66043476 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC CTTCGCTTCT GATCGCCGGC TGTGGCGACA TTGGTTCGCG ACTCGCTACT 
CGCCTGCTGC CTCACGGCTG GACCGTGCAT GGGCTGCGGC GCACTGTTTC CGAGCTTCCT
GCCGGTGTTC ACGGTGTGGC GGGCGATCTG TTCGAGACGC AAAAACCTGC CCAATGGCCT
GCTGCAGCAT TGGATTACGT GGTGTATTGC GCGACCCCCT CACAACGTGA CGAAGCGGGT
TACCGGATGG CTTACGTCGA GGGCCTGCGT AATGTGTTGA GCTGGCTCGA GCAGACCGGG
CAGCGGCCAA AGCGCTTGAT CTTCGTTTCA AGCAGCGGTG TTTACGGTCA GCAGAATGGG
GAATGGGTGG ATGAAACCTC CGCCACCGAG CCCGGCAACT ACACCGGCAC GGTGATGCTG
GAGGCCGAGC AGGTCGCGCT GAACAGCGGG CTGCCGGCCA CGGCGGTGAG ACTGACCGGT
ATTTACGGCC CGGGCCGCAG TGACCTGTCG AACCGCGTCC GCCAGGGGCA CAGCGTGAGG
ATCGATCCGC CGGTCTACGC CAATCGTATT CATGCCGACG ATGCGGCCGG TCTGCTGGAG
CACCTGCTGC TGGCGGATCA ACGCGGCGTT GCGCTGGAGA GTTGCTACCT GGGCGTCGAC
GACGATCCGG CCGCGCTGGC CGATGTGGTG GCGTGGATCC GTGAGTATCT GGGAGTGACC
GAATGGTCGG AGGAGGTCAG CGTGCAGCGC GTGGGCAGCA AGCGTTGCAG TAATGCCAGG
GCGCGAGCAT TGGGATGGGC GCCGATGTAC CCGGACTTTA GGGCAGGTTA TGCGGCTTTA
CTGGGCTAG
 
Protein sequence
MTAPSLLIAG CGDIGSRLAT RLLPHGWTVH GLRRTVSELP AGVHGVAGDL FETQKPAQWP 
AAALDYVVYC ATPSQRDEAG YRMAYVEGLR NVLSWLEQTG QRPKRLIFVS SSGVYGQQNG
EWVDETSATE PGNYTGTVML EAEQVALNSG LPATAVRLTG IYGPGRSDLS NRVRQGHSVR
IDPPVYANRI HADDAAGLLE HLLLADQRGV ALESCYLGVD DDPAALADVV AWIREYLGVT
EWSEEVSVQR VGSKRCSNAR ARALGWAPMY PDFRAGYAAL LG