| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0204 |
|---|
| Symbol | |
|---|
| ID | 3365680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 219306 |
|---|
| End bp | 219731 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637650547 |
|---|
| Product | biopolymer transport protein ExbD |
|---|
| Protein accession | YP_233315 |
|---|
| Protein GI | 66043474 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCCTGC ATCTTAACGA AGGCGGCGAC GATCTCGCCG AGAACCATGA AATCAACGTG
ACGCCGTTCA TCGACGTCAT GCTGGTGCTG CTGATCATCT TCATGGTGGC TGCACCGCTG
GCGACCGTGG ACATCAAGGT CGACCTGCCA GCGTCCACCG CCACACCGCA GCCCAGACCC
GAGAAACCGA TCTTTCTCAG CGTGAAAACC GACAAGAGCC TGTACCTGGG CGAGGAGAAG
GTTGCTCGCG AGCAGATCGG TCAGGTGCTG GACGCCCGCA CCAAGGGCAA GAAAGACACC
ACGATCTTCT TCCAGGCCGA CAAGGGCGTG GATTACGGTG ATCTGATGGA AGTCATGAAC
ACGCTTCGGG GTGCGGGTTA CCTGAAGGTC GGTCTGGTAG GTCTTGAGAC GGCTGGTAAG
AAATGA
|
|---|
| Protein sequence | MGLHLNEGGD DLAENHEINV TPFIDVMLVL LIIFMVAAPL ATVDIKVDLP ASTATPQPRP
EKPIFLSVKT DKSLYLGEEK VAREQIGQVL DARTKGKKDT TIFFQADKGV DYGDLMEVMN
TLRGAGYLKV GLVGLETAGK K
|
|---|
| |