Gene Psyr_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0200 
Symbol 
ID3365676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp213976 
End bp215373 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content61% 
IMG OID637650543 
Producthypothetical protein 
Protein accessionYP_233311 
Protein GI66043470 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.41443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG TCGCCCACGT CAATGATCCG CACCATGCGC CGGTGGTAAT CCGGCAGTTG 
CTTGAAAAGT TGGCTATCAG CTACAACGAA GTCGTGGACG AAAAGAACCT CCCTCCAGCG
CGCAAGGTGC AGGCCGTGCT GGTCGAGGAT GCTGTCGGTG CGTTGCTTAT CCTGTTTCCG
CAAAGCCAGT TGCTCGACCT CTCCCGCATT ACCGAGCTGA CCGGTCGCCA ACTGACCGCC
GTGCCGCACG AGCGGCTGGC GCGCATGCTG ACCAAGCACA ACCTGCGCGT ACTGCCAGGT
CTCCCGGCGC TGACCAGCTC ACCCTGCCTT TACGACGAGC GCCTGCTTCA GGAGCCAACA
CTGCTGGTAG GTTCGGGCGA GCCTGGTGTT CTGCTGGAAA TCAGCAGCGA GGACTTCAAG
GGCATGCTGA GCAAGGCCAG CGCCGCGCAC TTTGGTCAGT CTGTGGCGGC GATCCGGCCG
AACCTCGATC GTCCTGACGA CGATCCTGCA GAAATCACTC AGGCCATGCA TGCCTTCACG
GCGCGCCGCA TCCAGCAGCG TCTGGAAGCG ACTCTGGAGA TTCCGCCGCT GGCTGGCACT
GCGCAGAAAA TCATCAAACT GCGTGTCGAC CCCGATGCAA CCATCGATGA CATCACCGGC
GTCGTCGAAA CCGATCCCGC ACTGGCTGCT CAAGTCGTCA GCTGGGCCGC TTCGCCGTAT
TACGCGTCGA CCGGCAAGAT TCGTTCGGTC GAAGACGCAA TCGTCCGTGT ACTGGGCTTC
GATCTGGTGA TCAATCTGGC ACTGGGGCTC GCACTGGGCA AAACCCTGAG CCTGCCCAAG
GATCAGCCAC AACAGACCAC GCCGTACTGG CAACAGTCCA TCTACACCGC TGCCGTCATC
GAAGGCCTGA CCCGTGCCAT TCCGCGCGCC AGCCGGCCGG AGGGTGGCCT GAGCTACCTC
GCCGGCTTGC TGCACAACTT CGGCTACCTG CTGCTGGCGC ACGTGTTTCC ACCGCACTTC
ACCCTGATTT GCCGCCAGCT GGAAGTGAAC CCGCATTTGC ACCACAGCTT TATCGAGCAG
CATCTTCTGG GTATCAGCCG CGAGCAGATC GGGGCCTGGC TGATGCGCTA TTGGGACATG
CCGGATGAGC TCGCCATCGC ATTGCGTTTC CAGCACGACC CGCACTACAA GGGTGAGCAT
CACGTCTATG CCAACCTGGT CTATCTGGCG GTGCGCCTGC TGCGTGCCAA CGGTATCGGC
TCCGGTCCCG AACAGGATAT CCCGGACGAA TTGTTCGAAC GCCTGGGCCT GACGCGCGAA
AAAGCCAACG AATCGGTGAA AAAAGTGCTC GAGGCCGAAG TGCTGCTGCG CGAACTGGCG
TCGCAGTTCA GCAAGTAA
 
Protein sequence
MTEVAHVNDP HHAPVVIRQL LEKLAISYNE VVDEKNLPPA RKVQAVLVED AVGALLILFP 
QSQLLDLSRI TELTGRQLTA VPHERLARML TKHNLRVLPG LPALTSSPCL YDERLLQEPT
LLVGSGEPGV LLEISSEDFK GMLSKASAAH FGQSVAAIRP NLDRPDDDPA EITQAMHAFT
ARRIQQRLEA TLEIPPLAGT AQKIIKLRVD PDATIDDITG VVETDPALAA QVVSWAASPY
YASTGKIRSV EDAIVRVLGF DLVINLALGL ALGKTLSLPK DQPQQTTPYW QQSIYTAAVI
EGLTRAIPRA SRPEGGLSYL AGLLHNFGYL LLAHVFPPHF TLICRQLEVN PHLHHSFIEQ
HLLGISREQI GAWLMRYWDM PDELAIALRF QHDPHYKGEH HVYANLVYLA VRLLRANGIG
SGPEQDIPDE LFERLGLTRE KANESVKKVL EAEVLLRELA SQFSK