Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0200 |
Symbol | |
ID | 3365676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 213976 |
End bp | 215373 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637650543 |
Product | hypothetical protein |
Protein accession | YP_233311 |
Protein GI | 66043470 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.41443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAG TCGCCCACGT CAATGATCCG CACCATGCGC CGGTGGTAAT CCGGCAGTTG CTTGAAAAGT TGGCTATCAG CTACAACGAA GTCGTGGACG AAAAGAACCT CCCTCCAGCG CGCAAGGTGC AGGCCGTGCT GGTCGAGGAT GCTGTCGGTG CGTTGCTTAT CCTGTTTCCG CAAAGCCAGT TGCTCGACCT CTCCCGCATT ACCGAGCTGA CCGGTCGCCA ACTGACCGCC GTGCCGCACG AGCGGCTGGC GCGCATGCTG ACCAAGCACA ACCTGCGCGT ACTGCCAGGT CTCCCGGCGC TGACCAGCTC ACCCTGCCTT TACGACGAGC GCCTGCTTCA GGAGCCAACA CTGCTGGTAG GTTCGGGCGA GCCTGGTGTT CTGCTGGAAA TCAGCAGCGA GGACTTCAAG GGCATGCTGA GCAAGGCCAG CGCCGCGCAC TTTGGTCAGT CTGTGGCGGC GATCCGGCCG AACCTCGATC GTCCTGACGA CGATCCTGCA GAAATCACTC AGGCCATGCA TGCCTTCACG GCGCGCCGCA TCCAGCAGCG TCTGGAAGCG ACTCTGGAGA TTCCGCCGCT GGCTGGCACT GCGCAGAAAA TCATCAAACT GCGTGTCGAC CCCGATGCAA CCATCGATGA CATCACCGGC GTCGTCGAAA CCGATCCCGC ACTGGCTGCT CAAGTCGTCA GCTGGGCCGC TTCGCCGTAT TACGCGTCGA CCGGCAAGAT TCGTTCGGTC GAAGACGCAA TCGTCCGTGT ACTGGGCTTC GATCTGGTGA TCAATCTGGC ACTGGGGCTC GCACTGGGCA AAACCCTGAG CCTGCCCAAG GATCAGCCAC AACAGACCAC GCCGTACTGG CAACAGTCCA TCTACACCGC TGCCGTCATC GAAGGCCTGA CCCGTGCCAT TCCGCGCGCC AGCCGGCCGG AGGGTGGCCT GAGCTACCTC GCCGGCTTGC TGCACAACTT CGGCTACCTG CTGCTGGCGC ACGTGTTTCC ACCGCACTTC ACCCTGATTT GCCGCCAGCT GGAAGTGAAC CCGCATTTGC ACCACAGCTT TATCGAGCAG CATCTTCTGG GTATCAGCCG CGAGCAGATC GGGGCCTGGC TGATGCGCTA TTGGGACATG CCGGATGAGC TCGCCATCGC ATTGCGTTTC CAGCACGACC CGCACTACAA GGGTGAGCAT CACGTCTATG CCAACCTGGT CTATCTGGCG GTGCGCCTGC TGCGTGCCAA CGGTATCGGC TCCGGTCCCG AACAGGATAT CCCGGACGAA TTGTTCGAAC GCCTGGGCCT GACGCGCGAA AAAGCCAACG AATCGGTGAA AAAAGTGCTC GAGGCCGAAG TGCTGCTGCG CGAACTGGCG TCGCAGTTCA GCAAGTAA
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Protein sequence | MTEVAHVNDP HHAPVVIRQL LEKLAISYNE VVDEKNLPPA RKVQAVLVED AVGALLILFP QSQLLDLSRI TELTGRQLTA VPHERLARML TKHNLRVLPG LPALTSSPCL YDERLLQEPT LLVGSGEPGV LLEISSEDFK GMLSKASAAH FGQSVAAIRP NLDRPDDDPA EITQAMHAFT ARRIQQRLEA TLEIPPLAGT AQKIIKLRVD PDATIDDITG VVETDPALAA QVVSWAASPY YASTGKIRSV EDAIVRVLGF DLVINLALGL ALGKTLSLPK DQPQQTTPYW QQSIYTAAVI EGLTRAIPRA SRPEGGLSYL AGLLHNFGYL LLAHVFPPHF TLICRQLEVN PHLHHSFIEQ HLLGISREQI GAWLMRYWDM PDELAIALRF QHDPHYKGEH HVYANLVYLA VRLLRANGIG SGPEQDIPDE LFERLGLTRE KANESVKKVL EAEVLLRELA SQFSK
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