Gene Psyr_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0198 
Symbol 
ID3365674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp211908 
End bp213215 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content62% 
IMG OID637650541 
Productcitrate transporter 
Protein accessionYP_233309 
Protein GI66043468 
COG category[C] Energy production and conversion 
COG ID[COG2851] H+/citrate symporter 
TIGRFAM ID[TIGR00784] citrate transporter, CitMHS family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTT TCCTTGGCTT TGCCATGGTT ATTGCGTTCA TGTACCTGAT CATGAGCAAG 
CGCCTGACTG CGCTGATCGC TCTGATCCTG GTTCCGATCA TCTTCGCCCT GTTCGGTGGC
TTCGCGTCGC AGATCGGCCC GATGATGCTG GCAGGTATCA CCAAGCTGGC GCCGACCGGC
GTGATGCTGA TGTTCGCCAT TCTGTACTTT GCGCTGATGA TCGACTCCGG CCTGTTCGAC
CCGGCCGTGC GCAAGATCCT GAAAATGGTC AAGGGCGACC CGATGCGCAT TTCGGTCGGC
ACCGCCGTAC TGGCGCTGGT GGTGTCCCTC GACGGTGACG GCGCGACCAC CTACATGATC
TGCGTTGCCG CCATGCTGCC GCTGTACAGC CGCATCGGCA TGAGCCCGCG CATCATGGCC
GGCCTGATCA TTCTGGCCGG CGGCGTGATG AACATGACGC CCTGGGGCGG CCCGACCGCT
CGTGCGGCCA GTGCCCTGCA TGTCGACGCC TCCGATATCT TCGTGCCGAT GATCCCGGCC
ATGCTGGCAG GTGTGATCGC GATCCTGGCG ATTGCCTATT TCTACGGCAA GCGCGAACGT
GCCCGACTGG GTGAACTGCA CCTGCAGGGC GATGAAGTCG ACCACAGCGA AATCAGCGTC
TCGCAATTCC CTGATGCGCG CCGTCCAAAG CTGATCTGGT TCAACGCTGC CCTGACCCTG
ACCCTGATGG TCGCCCTGAT CATGGGCCTG CTGCCCCTGC CGGTCCTGTT CATGATCGCG
TTCAGTATCG CGATGATCAT CAACTACCCG AACCTGCAGG ACCAGAAGGA CCGCGTATCG
GCCCACGCCG GTAGCGTGCT GGCGGTGGTC GGCCTGATCT TCGCTGCGGG CATCTTCACC
GGCATCCTGT CCGGCACCGG CATGGTCGAC GCGATGTCGA AAAGCCTGCT GGCCGTGATC
CCTGACGCGC TGGGCCCGTA CCTCGCGGTG ATCACCGCGC TGGTGAGCAT GCCGTTCACC
TTCTTCATGT CCAACGACGC GTTCTACTAC GGCGTACTGC CAGTGCTGTC CGAAGCCGCT
GCCCACTACG GCATCAGCCC GGTGGAAATG GCCCGCGCGT CGATCGTCGG TCAGCCGGTT
CACCTGCTCA GCCCATTGGT GCCTTCGACC TACCTGCTGG TGGCCCTGGC CGGTATCGAG
TTCGGTGACC ACCAGCGCTT CACCCTTAAA TGGGCGATTC TGGTGTGCAT GTGCATCCTG
GTTGCCGCAC TGCTGATGGG CATCTTCCCG TTCTATAGCA GCATGTAA
 
Protein sequence
MLTFLGFAMV IAFMYLIMSK RLTALIALIL VPIIFALFGG FASQIGPMML AGITKLAPTG 
VMLMFAILYF ALMIDSGLFD PAVRKILKMV KGDPMRISVG TAVLALVVSL DGDGATTYMI
CVAAMLPLYS RIGMSPRIMA GLIILAGGVM NMTPWGGPTA RAASALHVDA SDIFVPMIPA
MLAGVIAILA IAYFYGKRER ARLGELHLQG DEVDHSEISV SQFPDARRPK LIWFNAALTL
TLMVALIMGL LPLPVLFMIA FSIAMIINYP NLQDQKDRVS AHAGSVLAVV GLIFAAGIFT
GILSGTGMVD AMSKSLLAVI PDALGPYLAV ITALVSMPFT FFMSNDAFYY GVLPVLSEAA
AHYGISPVEM ARASIVGQPV HLLSPLVPST YLLVALAGIE FGDHQRFTLK WAILVCMCIL
VAALLMGIFP FYSSM