Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0189 |
Symbol | |
ID | 3365665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 200642 |
End bp | 201979 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637650532 |
Product | ammonium transporter |
Protein accession | YP_233300 |
Protein GI | 66043459 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGC GTCAATTCGC AGGGCTCGGT GCCCTGTTGT CCCTCGCATT ACCTGGTCTT GCCCTGGCGG CTGATCCAGT GGCCGAGCCG GTGCTGAACT CTGGCGACAC TGCATGGATG CTGACCTCGA CCGCTCTGGT CCTGTTCATG ACCATCCCCG GTCTCGCGCT GTTCTACGGC GGCATGGTTC GTTCCAAGAA CATTCTGTCG GTGATGATGC AGTGCTTCGC CATCACCGGT CTGATCAGCA TCCTGTGGGT CGTCTACGGC TACAGCATCG CGTTTGACAC AACCGGTATG GAAGCGGGCG TCGTCAACTT CAATTCCTTC TTTGGCGGTA TGGGTAAAGC GTTCCTGGCA GGCATCACGC CGGCAAGCAT TACCGGTCCT GCTGCGTTGT TCCCTGAGGC GGTGTTCGTC ACCTTCCAGA TGACCTTCGC GATCATCACC CCTGCCCTAA TTGTCGGCGC CTTCGCAGAA CGCATGAAGT TCTCCGCGAT GCTGGTGTTC ATGGGTATCT GGTTCACTCT GGTCTACGCG CCAATCGCCC ACATGGTCTG GGGCGGCGTC GGTGGCCTGT TGTGGGACTG GGGCGTTCTG GACTTCGCTG GCGGTACCGT CGTACATATC AACGCCGGTG TAGCCGGTCT TGTAGCGTGC CTGGTACTGG GCAAGCGCAA AGGCTTCCCG ACCACGCCGA TGGCGCCGCA CAACCTGGGT TACACCCTGA TCGGCGCAGC GATGCTCTGG GTCGGCTGGT TCGGCTTCAA CGCCGGTTCC GCCGCTGCGG CCAACGGTAC TGCCGGTATG GCCATGCTGG TCACTCAAAT CGCTACCGCG GCCGCCGCAT TGGGCTGGAT GTTTGCCGAG TGGCTGACTC ACGGTAAGCC AAGTGCTCTG GGTATTGCCT CTGGTGTGGT TGCCGGCCTG GTTGCCGTTA CCCCTGCGGC CGGTACCGTC GGCCCGATGG GCGCGCTGAT CATCGGTCTG GCAGCAGGCG TGATCTGCTT CTTCTGCGCG ACCAGCCTCA AGCGCAAGCT GGGCTACGAC GACTCCCTGG ATGCGTTCGG CGTTCACGGC ATCGGCGGTA TCGTCGGCGC CATCCTGACC GGTGTGTTCG CAGCACCTGC ACTGGGCGGC TTCGGCACCG TGACCGACAT CGGTGCTCAG GTCTGGATTC AGTTCAAGGG CGTCGCGTTC ACCGTTGTCT ACACCGCAAT CGTGACCTTC ATCATCCTCA AGGTGCTGGA TGCGGTCATG GGTCTGCGCG TCACCGACGA GGAAGAGTCT GTCGGTCTGG ACCTTGCGCA ACACAACGAG CGTGGCTACA ACTTGTAA
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Protein sequence | MTLRQFAGLG ALLSLALPGL ALAADPVAEP VLNSGDTAWM LTSTALVLFM TIPGLALFYG GMVRSKNILS VMMQCFAITG LISILWVVYG YSIAFDTTGM EAGVVNFNSF FGGMGKAFLA GITPASITGP AALFPEAVFV TFQMTFAIIT PALIVGAFAE RMKFSAMLVF MGIWFTLVYA PIAHMVWGGV GGLLWDWGVL DFAGGTVVHI NAGVAGLVAC LVLGKRKGFP TTPMAPHNLG YTLIGAAMLW VGWFGFNAGS AAAANGTAGM AMLVTQIATA AAALGWMFAE WLTHGKPSAL GIASGVVAGL VAVTPAAGTV GPMGALIIGL AAGVICFFCA TSLKRKLGYD DSLDAFGVHG IGGIVGAILT GVFAAPALGG FGTVTDIGAQ VWIQFKGVAF TVVYTAIVTF IILKVLDAVM GLRVTDEEES VGLDLAQHNE RGYNL
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