Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0185 |
Symbol | xerC |
ID | 3365661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 197894 |
End bp | 198793 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637650528 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_233296 |
Protein GI | 66043455 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGC ATCTGGACGC CTACTGCATG CACCTGCGCA GTGAGCGCCA GGTGTCGCCT CACACGCTGG AAGCCTACCG ACGCGACCTG GGTAAGGTCC TGGCGTATTG CCAGAAGGCA CAGGTGTCGA GCTGGAGTGA CCTGGATATC CAGCACCTGC GCAGCTTCAC TGCCCGCCAG CACCAGCAGG GCCAGTCTTC ACGCAGCCTG GCGAGGATGC TGTCGGCGGT GCGCGGCTTC TACAAGTACC TCAATCGCGA AGGCATCTGC CAGCACGACC CGGCAAACGG TCTGTCACCG CCCAAGGGCG AGCGGCGTCT GCCCAAGACC CTGGACACCG ACCGCGCCGC GCAATTGCTG GACGGCGGCG TTGAAGATGA TTTCCTGGCG CACCGCGACC AAGCCATCCT GGAGCTGCTG TACTCGTCAG GGTTGCGCCT CTCCGAACTG ACCGGTCTGA ATCTGGACCA GCTGGACCTG CGTGACGGAC TGGTGCAGGT GCTGGGTAAG GGCAGCAAGA CCCGCGTATT GCCTGTGGGC AGCAAGGCGC GCCAGGCACT GGAAGTCTGG CTGCCGCTGC GCGCCCTGAC CAATCCGCAG GACGACGCGG TATTTGTCAG CCAGCAAGGC AAGCGCCTCG GCCCGCGCGC CATTCAGGTG CGACTCAAGG CAGCCGGTGA GCGAGAGCTG GGGCAGAATC TGCACCCGCA CATGTTGCGG CACTCCTTCG CCAGTCATCT GCTCGAATCG TCACAGGACC TGCGCGCCGT GCAGGAGCTG CTTGGTCATG CGGATATTAA GACCACGCAG ATATATACAC ACCTGGACTT CCAGCATTTG GCTACTGTTT ATGACAGCGC CCATCCCCGA GCCAAACGTA AAGGAACTGC AGATGATTAA
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Protein sequence | MDQHLDAYCM HLRSERQVSP HTLEAYRRDL GKVLAYCQKA QVSSWSDLDI QHLRSFTARQ HQQGQSSRSL ARMLSAVRGF YKYLNREGIC QHDPANGLSP PKGERRLPKT LDTDRAAQLL DGGVEDDFLA HRDQAILELL YSSGLRLSEL TGLNLDQLDL RDGLVQVLGK GSKTRVLPVG SKARQALEVW LPLRALTNPQ DDAVFVSQQG KRLGPRAIQV RLKAAGEREL GQNLHPHMLR HSFASHLLES SQDLRAVQEL LGHADIKTTQ IYTHLDFQHL ATVYDSAHPR AKRKGTADD
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