| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0182 |
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| Symbol | |
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| ID | 3365658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 195060 |
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| End bp | 196307 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637650525 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_233293 |
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| Protein GI | 66043452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCT TCAACTACCG CGACGGTGAG CTGTTCGCGG AAGGGGTAGC ATTGTCTGCC
ATTGCCGAGC GCTTCGGCAC GCCGACCTAT GTCTACTCGC GCGCTCACAT CGAAGCGCAA
TACCGTGCCT ACGCCGACGC GCTGAGCGGC ATGCCGCATA TGGTCTGCTT CGCCGTAAAA
GCCAACTCCA ACCTGGGCGT GCTCAATGTC CTGGCGCGCC TTGGCGCCGG TTTCGACATC
GTCTCGCGTG GCGAGCTGGA GCGTGTGCTG GCGGCGGGTG GCAAAGCCGA AAAGATCGTG
TTTTCCGGTG TCGGCAAGAC CCGCGAAGAC ATGCGGCGCG CCCTTGAAGT CGGCGTGCAC
TGCTTTAACG TCGAATCCAC CGACGAGCTG GAGCGCCTGC AGGAAGTGGC TGCCGAACTC
AACGTTCGGG CGCCGATATC GCTGCGGGTC AATCCGGATG TGGATGCAGG CACTCACCCC
TACATCTCCA CCGGCCTCAA GGAAAACAAG TTCGGTATCG CCATTGCAGC AGCGGAAGAC
GTTTACATTC GCGCCTCGCA ACTGCCGAAC CTGGAAGTGA TCGGGGTCGA CTGCCATATC
GGCTCGCAAC TGACCACGCT CGAACCGTTC ATCGATGCGC TGGATCGCCT GCTGGCCCTG
GTCGATCGTC TGGGCGATTG CGGCATTCAT CTGCATCACA TCGATCTGGG TGGCGGTCTT
GGCGTGCGTT ATCGCGACGA AGAGCCTCCG CTGGCGGCCG ACTACATCAA GGCCGTGCGC
GAGCGTCTGG CCGGTCGCGA CCTGGGGCTG CTGTTCGAGC CGGGACGCTT CATCGTCGCC
AACGCAGGCG CGTTGCTGAC CCGTGTCGAA TACCTCAAGC ATACCGAGCA CAAGGATTTT
GCCATCGTCG ATGCGGCGAT GAACGATCTG ATCCGGCCTG CGCTGTATCA GGCCTGGATG
GATGTCACGG CGGTGCGTCC GCGTGACAGC GAACCTCGTG CGTACGATAT CGTCGGGCCG
ATCTGCGAGA CCGGCGACTT CCTCGCCAAG GGGCGCGAGC TGGCGCTGGC CGAGGGCGAT
CTGCTGGCCG TTCATTCAGC CGGTGCCTAT GGCTTCGTCA TGAGCTCGAA CTACAACACC
CGTGGCCGTG CCGCCGAGGT ACTGGTCGAC GGTTCCCAGG CTTTTGAAGT GCGTCGTCGC
GAAACCGTGG CCGAGCTGTT CGCTGGCGAA AGCCTGCTGC CGGAGTAA
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| Protein sequence | MDAFNYRDGE LFAEGVALSA IAERFGTPTY VYSRAHIEAQ YRAYADALSG MPHMVCFAVK
ANSNLGVLNV LARLGAGFDI VSRGELERVL AAGGKAEKIV FSGVGKTRED MRRALEVGVH
CFNVESTDEL ERLQEVAAEL NVRAPISLRV NPDVDAGTHP YISTGLKENK FGIAIAAAED
VYIRASQLPN LEVIGVDCHI GSQLTTLEPF IDALDRLLAL VDRLGDCGIH LHHIDLGGGL
GVRYRDEEPP LAADYIKAVR ERLAGRDLGL LFEPGRFIVA NAGALLTRVE YLKHTEHKDF
AIVDAAMNDL IRPALYQAWM DVTAVRPRDS EPRAYDIVGP ICETGDFLAK GRELALAEGD
LLAVHSAGAY GFVMSSNYNT RGRAAEVLVD GSQAFEVRRR ETVAELFAGE SLLPE
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