| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0178 |
|---|
| Symbol | |
|---|
| ID | 3365654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 193552 |
|---|
| End bp | 193959 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637650521 |
|---|
| Product | nucleoside diphosphate kinase regulator |
|---|
| Protein accession | YP_233289 |
|---|
| Protein GI | 66043448 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG CACCTTCGAT CATCCTCACT CGGCTCGACG TACAGCGTCT TGAAAAGTTT
ATCGCCGACC AGAATGAAGA CACACCTGGC ATCCAGGCAC TGCAGGCCGA ACTGGACCGC
GCCGACCAGG TGGTTGGCCA CGATGAAGTG CCTGCGGGCG TTGTGACCAT GAATTCGCGC
GTGCATTGCC GCGAAGAAGT CAGCGGCAAG GACTATCACC TCAAGCTGGT TTATCCACAG
GATGCGGGCG CAGACGGCAC CGTCTCGGTC CTGGCACCAA TGGGCTCGGC GCTGCTGGGC
CTGCAAATCG GCCAACACAT CGACTGGCCT GCACCGGGCG GCAAGACCCT GAAACTGACC
TTGCTGGCGG TGGAGTATCA GCCGGAAGCG GCGGGCGAAT ACGAGTAA
|
|---|
| Protein sequence | MTTAPSIILT RLDVQRLEKF IADQNEDTPG IQALQAELDR ADQVVGHDEV PAGVVTMNSR
VHCREEVSGK DYHLKLVYPQ DAGADGTVSV LAPMGSALLG LQIGQHIDWP APGGKTLKLT
LLAVEYQPEA AGEYE
|
|---|
| |