Gene Psyr_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0174 
SymbolgltP 
ID3365650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp188229 
End bp189560 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content58% 
IMG OID637650517 
Productglutamate/aspartate:proton symporter 
Protein accessionYP_233285 
Protein GI66043444 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG CAAAGCTGAG TCTGGCCTGG CAGATTCTGA TCGGACTGGT ACTGGGTATC 
GCTGTGGGGG CGCTACTCAA TCATTTCAGC GCAGAAAAGG CCTGGTGGAT CACCAACATC
CTGCAGCCCG CAGGCGATAT CTTCATTCGT CTGATCAAGA TGATCGTTAT TCCCATCGTT
GTCGCCTCGC TGATCGTCGG CATCGCGGGC GTGGGCGATG CCAAGAAGCT GGGACGTATC
GGTCTCAAGA CCATTCTCTA TTTTGAAGTC GTGACCACTA TCGCGATTCT GGTGGGGCTG
GTGCTGGCCA ACGTGTTCCA TCCGGGCACC GGCATCGACA TGAGCACACT GGGCACCGTC
GATATTTCCA AGTATCAGCA GACGACGGCT GAAGTTCAGC ACGATCATGC GTTTATCGCG
ACCATTCTCA ACCTGATCCC GTCCAACATC TTCGCCGCCA TGGCGCGTGG CGAGATGCTG
CCGATCATCT TCTTTTCGGT GTTGTTCGGC CTGGGGCTTT CCAGTCTGCA AGCCGAGGTC
CGTGAGCCGC TGGTGAAGCT GTTTCAGGGC GTCTCGGAGA CCATGTTCAA GGTCACTCAC
ATGATCATGA ACTACGCGCC GATTGGTGTG TTTGCCCTGA TTGCGGTGAC TGTCGCCAAC
TTCGGCTTCG CCTCCCTGCT GCCGCTCGCC AAGCTGGTGA TTCTGGTTTA CGTGGCCATC
GCCTTCTTCG CCTTCGTGGT GCTGGGGCTG ATCGCTCGTG CATTCGGCTT TTCGGTCATC
AGGCTGATGC GTATCTTCAA GGACGAGCTG ATTCTGTCCT ACTCCACGGC CAGCTCTGAA
ACCGTGCTGC CACGGGTGAT CCAGAAGATG GAAGCCTATG GCGCACCGAA GGCGATTTGC
AGTTTCGTGG TGCCCACGGG CTACTCGTTC AACCTTGACG GTTCGACGCT CTATCAGAGC
ATCGCAGCCA TCTTCATCGC TCAGTTGTAC GGCATCGACC TGTCGATTGG CGCGCAATTG
ATGTTGGTGC TGACCCTGAT GGTCACCTCC AAAGGCATCG CGGGCGTACC GGGCGTTTCC
TTCGTTGTGC TGCTGGCGAC CCTGGGCAGC GCCGGTATTC CACTGGAAGG CCTGGCGTTC
ATCGCTGGCG TCGACCGCAT CATGGACATG GCGCGTACCG CTTTGAACGT GATCGGCAAT
GCGCTGGCAG TGCTGGTTAT CTCGCGCTGG GAGGGCATGT ATGACGATGC CAAGGGCGAG
CGCTACTGGA ACTCCCTGCC GCACTGGCGC AGCAAAGAGC CAGTGCCGAT GGGGCAACCG
ACGGCGGACT GA
 
Protein sequence
MKKAKLSLAW QILIGLVLGI AVGALLNHFS AEKAWWITNI LQPAGDIFIR LIKMIVIPIV 
VASLIVGIAG VGDAKKLGRI GLKTILYFEV VTTIAILVGL VLANVFHPGT GIDMSTLGTV
DISKYQQTTA EVQHDHAFIA TILNLIPSNI FAAMARGEML PIIFFSVLFG LGLSSLQAEV
REPLVKLFQG VSETMFKVTH MIMNYAPIGV FALIAVTVAN FGFASLLPLA KLVILVYVAI
AFFAFVVLGL IARAFGFSVI RLMRIFKDEL ILSYSTASSE TVLPRVIQKM EAYGAPKAIC
SFVVPTGYSF NLDGSTLYQS IAAIFIAQLY GIDLSIGAQL MLVLTLMVTS KGIAGVPGVS
FVVLLATLGS AGIPLEGLAF IAGVDRIMDM ARTALNVIGN ALAVLVISRW EGMYDDAKGE
RYWNSLPHWR SKEPVPMGQP TAD